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Domain assignment for gi|374998523|ref|YP_004974022.1|NC_016585 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|374998523|ref|YP_004974022.1|NC_016585
Domain Number 1 Region: 29-377
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 2.17e-64
Family L-arabinose binding protein-like 0.00018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|374998523|ref|YP_004974022.1|NC_016585
Sequence length 392
Comment putative branched-chain amino acid ABC transporter substrate-binding protein [Azospirillum lipoferum 4B plasmid AZO_p1]
Sequence
MKRTLAHLVTVSALALSVALGAGAAQAKEFLLGSELPLTGSLARVGQGMHEGISVAVEMA
NKSYAGKHSFKVQTIDDETSPAKAVAAVEKLVGDGVVAITGGYGSNIIGPASEAAQKAGL
VYITSGGVSPELTQRGYPTFFRINNTDGYALAMIGLLQDMGAKKVSIVYLNKDATSSLAK
QVNTALTAKGVTVGMHEFDASTSDFKPLMNKVKLQDRPDTIAMVGYENDYVGILRASKVL
KPQVKAVVGVWSLATAQMAKEFPDLMENVYGTSMLPYPVEFTQPEAVEFAATYKKLFNKD
PDYLGQFGYVQTRLLIDAVVRADEAGTLGKGGLPDELRKTDANTLIGRVTFDKNGDNLNF
THRMGQHQGGKVVLVWPQDAANGKMNFPAVPW
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Identical sequences G7ZAL5
WP_014188301.1.44154 gi|374998523|ref|YP_004974022.1|NC_016585 gi|374998523|ref|YP_004974022.1|

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