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Domain assignment for gi|377810664|ref|YP_005043104.1|NC_016626 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|377810664|ref|YP_005043104.1|NC_016626
Domain Number 1 Region: 80-354
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 3.88e-58
Family L-arabinose binding protein-like 0.000081
Further Details:      
 
Domain Number 2 Region: 21-78
Classification Level Classification E-value
Superfamily lambda repressor-like DNA-binding domains 6.75e-17
Family GalR/LacI-like bacterial regulator 0.0056
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|377810664|ref|YP_005043104.1|NC_016626
Sequence length 363
Comment LacI family transcriptional regulator [Burkholderia sp. YI23 plasmid byi_1p]
Sequence
MAKKKAAPSEEAGKRSRASGVTLRDVARFAGVSSATVSRVMNNPDVVSEELRARIMVAID
HLGWVPHAAARALATHRTGTIGAVFPTLANEHFATAIQKLQESLERAGYTLLLACSEYDL
EREYRQVRTMLERGVDAVVLVGEAHHPDLQPLLSQRRIPFVNTFVYREGSESLCVGVDNH
QAFFDFTTYLVGLGHRRFAMLSQDSDTNDRARARREGVRDALAEHGLGVSAAHMVEGFWG
ARVGRALFSKVMSTPQPPTVVICGNGSFAMGAMLEAMQRGYDIPRDLSLVGFDDFELMSE
LPIPITTVRVPSAEIGTLAAGMILAELAEKGSARSVKCEAEIIVRASSGAPPHARRKRGV
ADR
Download sequence
Identical sequences G8MK78
WP_014251849.1.56761 gi|377810664|ref|YP_005043104.1|NC_016626 gi|377810664|ref|YP_005043104.1|

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