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Domain assignment for gi|384206197|ref|YP_005591972.1|NC_017229 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|384206197|ref|YP_005591972.1|NC_017229
Domain Number 1 Region: 13-108
Classification Level Classification E-value
Superfamily Enzyme IIa from lactose specific PTS, IIa-lac 3.14e-26
Family Enzyme IIa from lactose specific PTS, IIa-lac 0.00062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|384206197|ref|YP_005591972.1|NC_017229
Sequence length 115
Comment PTS system, Lactose/Cellobiose specific IIA subunit [Borrelia afzelii PKo plasmid cp26]
Sequence
MNKKIYSIEELVDKISMPVVAYSGEAKSFLREALEYAKNKDYEKAALTIQESKNSIAKAH
EAHREIIQQSATNPNSVKTPFILIHAEDHLMSAISELSIFEELINVYKIINEIKK
Download sequence
Identical sequences Q0SL50
390236.BAPKO_5004 gi|111074123|ref|YP_709251.1| gi|111074123|ref|YP_709251.1| gi|111074123|ref|YP_709251.1|NC_008274 gi|216997238|ref|YP_002333783.1|NC_011650 gi|384206197|ref|YP_005591972.1|NC_017229 WP_011600700.1.101990 WP_011600700.1.4002 WP_011600700.1.40725 WP_011600700.1.72423 WP_011600700.1.79404 WP_011600700.1.94617

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