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Domain assignment for gi|386336383|ref|YP_006032553.1|NC_017575 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|386336383|ref|YP_006032553.1|NC_017575
Domain Number 1 Region: 130-399
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 9.26e-63
Family L-arabinose binding protein-like 0.00004
Further Details:      
 
Domain Number 2 Region: 72-131
Classification Level Classification E-value
Superfamily lambda repressor-like DNA-binding domains 1.31e-17
Family GalR/LacI-like bacterial regulator 0.0024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|386336383|ref|YP_006032553.1|NC_017575
Sequence length 405
Comment dna-binding sucrose operon transcriptional repressor protein [Ralstonia solanacearum Po82 plasmid megaplasmid]
Sequence
MSLIEESTTSMEMEGRATSTDGPPSPGAGWCRQDPEPLAGGRRIPAGGWCTRRFTPSREL
SIVLGMVSIPQKRPTIRDVATLAGVSTSTVSRVLNNSGYVKAEVRERIEAVVSRMHYTPS
ELAKQLKSQRSGLIGVIIPKINSYTTSEIVAGISSTLAPLRYQMLLANTANSVAEEVTAY
DLFRRQRVAGVLHLATTVNTDLIDAIREAGLPIVMIGQDASHLGITSVIQNERSAARQIT
EHLLSLGHKRVGLVTVGEEDIQVGRERTAGYLDALQARGLPVDPELIICASFRSGAGEEA
AERLLRASGDARCTAILAVTDRLAVGVMACLHDHGLRVPEDMAVAGMGDSDTASMVRPAL
STVHYDYAGTGAEAAQLMLKLWEAEHASQVERIVMPYRLALRRST
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Identical sequences F6GBF1
gi|386336383|ref|YP_006032553.1|NC_017575 gi|386336383|ref|YP_006032553.1|

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