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Domain assignment for gi|387825559|ref|YP_005804891.1|NC_017395 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|387825559|ref|YP_005804891.1|NC_017395
Domain Number 1 Region: 12-108
Classification Level Classification E-value
Superfamily Enzyme IIa from lactose specific PTS, IIa-lac 9.68e-26
Family Enzyme IIa from lactose specific PTS, IIa-lac 0.00066
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|387825559|ref|YP_005804891.1|NC_017395
Sequence length 115
Comment PTS system cellobiose-specific transporter subunit IIA [Borrelia burgdorferi JD1 plasmid JD1 cp26]
Sequence
MNKKIYSIEELIDKISMPVVAYSGEAKSFLREALEYAKNKEYDKAELTIQESKKSIAKAH
EAHREIIHQSATNPSSVKTPFILIHAEDHLMSAISELSIFEELINVYKIINEIKK
Download sequence
Identical sequences E4QRP9
gi|219723267|ref|YP_002476680.1|NC_011853 gi|387825559|ref|YP_005804891.1|NC_017395 gi|410683499|ref|YP_006939607.1|NC_018983 WP_012622042.1.66939 WP_012622042.1.70456 gi|387825559|ref|YP_005804891.1|

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