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Domain assignment for gi|433611380|ref|YP_007194841.1|NC_019849 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|433611380|ref|YP_007194841.1|NC_019849
Domain Number 1 Region: 69-319
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 1.65e-28
Family L-arabinose binding protein-like 0.0031
Further Details:      
 
Domain Number 2 Region: 10-66
Classification Level Classification E-value
Superfamily lambda repressor-like DNA-binding domains 0.00000000244
Family GalR/LacI-like bacterial regulator 0.0066
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|433611380|ref|YP_007194841.1|NC_019849
Sequence length 356
Comment Transcriptional regulator [Sinorhizobium meliloti GR4 plasmid pRmeGR4d]
Sequence
MANGGRKKATIYDLSVLSGSSPSTVSAVLNGTWRKRRIKESTAELIRSLAETHSYTANRQ
ARGLRSSRSGLVGLLLPVHDNRYFSSLAQTFEAHVRSKGQCPIVVSASRDPKEERRTAET
LISYSIDELFICGATDPDGVHEVCEAAGLRHINIDLPGTKVPSVISDNFEGGRLLTEAII
RHFPAERPLEPDDLYLFGGRDDHATRERIRGFRAVKQELLGSDPDECIWPTGYAADNARK
AFEAFYEQHGKLPRGFFVNSSINFEGLLRFMAEHPLENFTDLVVGCYDYDPFASFLPFPV
IMIRQNIEGMIAKAFEVIEEPRASLQIHMIEPQLVPPRTALTGPLDALMDSEMPRE
Download sequence
Identical sequences gi|433611380|ref|YP_007194841.1| WP_015243340.1.92524 gi|433611380|ref|YP_007194841.1|NC_019849

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