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Domain assignment for gi|440224749|ref|YP_007338145.1|NC_020062 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|440224749|ref|YP_007338145.1|NC_020062
Domain Number 1 Region: 45-327
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 1.81e-70
Family L-arabinose binding protein-like 0.000012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|440224749|ref|YP_007338145.1|NC_020062
Sequence length 328
Comment putative sugar ABC transporter, substrate-binding protein [Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c]
Sequence
MSNSTKRDTAFINTPRRSALKLGLAGTLILALSCGVSPAFAAGKPKVGLIMKSLSNEFFK
QMKAGADKYAAENKDKFDFKAVGMKDERDFASQVDAVENFVTQKYDIIVVAPADSKAMAT
PLAKAVKAGVKVINIDVPLDADAKKAAGIDLAFFGPDNAAGAKLAGDALAKDLGPGAKVV
ILEGNPEADNAKERKAGFMDSIKNGKLELLDSKTAHWETEEANTVMTNFLTKYKDIQGVM
AANDSMALGVVKALDASGQAGKIKVVGFDNIPSVKPLIKDGKMLASVEQYGAEMAAMGIK
YGLREYAGEKFTGWVKTDVTLVTAKDLK
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Identical sequences L0LZQ0
WP_015343806.1.25425 gi|440224749|ref|YP_007338145.1| gi|440224749|ref|YP_007338145.1|NC_020062

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