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Domain assignment for gi|500161578|ref|WP_011836248.1|NZ_AKBU01000003 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|500161578|ref|WP_011836248.1|NZ_AKBU01000003
Domain Number 1 Region: 398-485
Classification Level Classification E-value
Superfamily SpoIIaa-like 0.00000000000608
Family Anti-sigma factor antagonist SpoIIaa 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|500161578|ref|WP_011836248.1|NZ_AKBU01000003
Sequence length 496
Comment antisigma-factor antagonist STAS [Rhodobacter sphaeroides 2.4.1 plasmid Ax]
Sequence
MISFATYRQQWLGHVRGDLLSGLVVALALIPEAIAFSIIAGVDPKVGLYASFSIAVVTAI
AGGRPGMISAATAATAVLMVTLVRDHGLQYLLAATVLAGLIQIALGLLKLGFVMRYVSRS
VMTGFVNALAILIFLAQLPELDPRAVPPLTYLLVAAGLAIIYLFPRLTRAVPSPLVTIIV
LTALTLGLGLDVRTVGDMGALPDTLPVFLIPDIPLTFETLRIILPPATAVAVVGLLESLM
TQTLVDELTDTRSSRNQECIGQGLANAATGFIGGMAGCAMIGQSMINVKSGGRGRLSCFV
AGVFLLILVVGLGDVVSRIPMAALVAIMIMVSIGTFSWSSLKALRTHPRSSSVVMLATVA
TVVWTHNLALGVLVGVLLSGIFFAAKIAQLFAVSSELSACGRARTYRVEGQLFYGSVEDF
MAAFDFREPLERVTIDVSRAHIWDISSVQALDMAVLKFRREGAEVRIVGMNEASETLVDR
LALHDRPGALDRLTAH
Download sequence
Identical sequences Q3HKG0
272943.RSP_4257 WP_011836248.1.22285 WP_011836248.1.62547 WP_011836248.1.80699 WP_011836248.1.8565 YP_001033889.1.90827 gi|125654696|ref|YP_001033889.1|NC_009008 gi|500161578|ref|WP_011836248.1|NZ_AKBU01000003 gi|500161578|ref|WP_011836248.1|NZ_AKVW01000003 gi|125654696|ref|YP_001033889.1| APC63695

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