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Domain assignment for gi|15602571|ref|NP_245643.1| from Pasteurella multocida subsp. multocida str. Pm70

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|15602571|ref|NP_245643.1|
Domain Number 1 Region: 12-220
Classification Level Classification E-value
Superfamily Ribonuclease H-like 1.77e-65
Family DnaQ-like 3'-5' exonuclease 0.00000236
Further Details:      
 
Domain Number 2 Region: 204-310
Classification Level Classification E-value
Superfamily HRDC-like 2.06e-25
Family RNase D C-terminal domains 0.0005
Further Details:      
 
Domain Number 3 Region: 307-378
Classification Level Classification E-value
Superfamily HRDC-like 0.00000000000000828
Family RNase D C-terminal domains 0.0022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|15602571|ref|NP_245643.1|
Sequence length 383
Comment ribonuclease D [Pasteurella multocida subsp. multocida str. Pm70]
Sequence
MNSQQKEIKNKPHFQVITSDLALAEICYSAQQKAVIALDTEFVRIKTLYPQLGLIQLYDG
ERVSLIDPTTIQDFSPFIALLANTAVLKVLHACSEDLEVFQHSFNQLPTPMLDTQIMANF
LGFPNSTGLATLVQHYFQLEIDKGASRTDWLARPLSDNQLIYAAADVWYLLPLYQRMQEA
LAQTRWQEAAQQDCEALLLKREQHKDPELAYLGIPNAWRLTPSELMRLKLLAKWRQEEAT
KRDLALNFVVRAEHLWQVAKHNPKHTSELLALGLSHHEVRIHGKKILHLIGQLKRFDDVD
YPMPIVRIADDPRYKKALKGLQQKLKSIAPPDLAAEVIASKRGLENLMKWCWLDNQDPTQ
LPELLVGWRREFGLVLLNTLANG
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Identical sequences Q9CMV0
WP_010906805.1.12311 WP_010906805.1.15732 WP_010906805.1.19996 WP_010906805.1.21657 WP_010906805.1.51342 WP_010906805.1.6219 WP_010906805.1.62389 WP_010906805.1.66990 WP_010906805.1.8281 WP_010906805.1.89773 WP_010906805.1.9947 272843.PM0706 gi|15602571|ref|NP_245643.1|

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