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Domain assignment for gi|15603733|ref|NP_246807.1| from Pasteurella multocida subsp. multocida str. Pm70

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|15603733|ref|NP_246807.1|
Domain Number 1 Region: 75-243
Classification Level Classification E-value
Superfamily alpha/beta knot 6.8e-51
Family YggJ C-terminal domain-like 0.0000000588
Further Details:      
 
Domain Number 2 Region: 2-71
Classification Level Classification E-value
Superfamily PUA domain-like 4.72e-18
Family YggJ N-terminal domain-like 0.00031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|15603733|ref|NP_246807.1|
Sequence length 244
Comment 16S ribosomal RNA methyltransferase RsmE [Pasteurella multocida subsp. multocida str. Pm70]
Sequence
MRIPRIYHPVLLQGVKHCELSEDAANHVGRVLRMQAGDKLVLFDGSNHVYDAQITQISKK
HVEVDILQHQWDDRESPLKIHLGQVISRGERMEFTIQKSVELGVHVITPLWSERCGVKLD
ADRLEKKIQQWQKIAVAACEQCGRNVVPEIRPMMKLQDWCAEKDGALKLNLHPRAQYSIR
TLPDIPAAGVRLLIGSEGGLSAQEIAQTEQQDFIEVLLGKRVLRTETASLAAITALQICF
GDLG
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Identical sequences Q9CJX2
WP_010907390.1.12311 WP_010907390.1.15732 WP_010907390.1.40210 WP_010907390.1.45422 WP_010907390.1.4808 WP_010907390.1.53852 WP_010907390.1.6219 WP_010907390.1.62389 WP_010907390.1.66990 WP_010907390.1.81885 WP_010907390.1.89773 WP_010907390.1.9746 WP_010907390.1.9947 272843.PM1868 gi|15603733|ref|NP_246807.1|

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