SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|77458659|ref|YP_348165.1| from Pseudomonas fluorescens Pf0-1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|77458659|ref|YP_348165.1|
Domain Number 1 Region: 47-232
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 6.22e-39
Family Phosphate binding protein-like 0.092
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|77458659|ref|YP_348165.1|
Sequence length 283
Comment phosphonate-binding periplasmic protein [Pseudomonas fluorescens Pf0-1]
Sequence
MLKRTLALTAGLALSLSAVLAQAAEVLKVSAIPDEAPTELLRKFEPLGKYLQQQLGMDVQ
FVPVADYPAVVEALATDRLDLAWLGGFTFVQARLKTGNAIPLVQREQDAQFTSKFITADP
NVKSLADLKGKTFAFGSVSSTSGSLMPRYFMLKDGIKPESYFSRVGYSGAHDATVAWVQA
GKVDAGVLNASVWQKLVDAGKVDTNKVKVFATTPTYFDYNWTVRGTLDPALAAKIKKAFL
DLDPANPEHKKILDLQAASRFIETSPDNYKGIEEAARAADLLK
Download sequence
Identical sequences Q3KDI0
gi|77458659|ref|YP_348165.1| WP_011333856.1.2668 205922.Pfl01_2434

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]