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Domain assignment for gi|77459029|ref|YP_348535.1| from Pseudomonas fluorescens Pf0-1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|77459029|ref|YP_348535.1|
Domain Number 1 Region: 90-298
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 5.43e-42
Family Phosphate binding protein-like 0.0061
Further Details:      
 
Domain Number 2 Region: 4-85
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 4.54e-18
Family LysR-like transcriptional regulators 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|77459029|ref|YP_348535.1|
Sequence length 308
Comment LysR family transcriptional regulator [Pseudomonas fluorescens Pf0-1]
Sequence
MDKLSNMSVYVKVVEMGSFTAVANHLDSTVGNVSRAVSALENVLDARLLQRSTRRLSVTD
AGRRFYERCIKILADLESAEAEASNAALKPRGTLRVHCVPGLARHLVTGAVLAYRNEFPD
VTVDLMLSQRMPNLLEDQLDVSILIARTLPDSAYVSQKIGVSHCVLAASPDYLERHGTPT
TPDELSAHQCLLLGTVDYVRDEWQLKSKAGDATFVPTGPSFSVNDMDAMAVAIRQGAGIG
LLAGFTAIDDFRSGQLVRVLPDYHTYERNVYAVYTSRQFVDAKITRFIDSLKDRVGSQLA
ATAQALID
Download sequence
Identical sequences Q3KCG0
gi|77459029|ref|YP_348535.1| 205922.Pfl01_2804 WP_011334216.1.2668

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