SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|77459963|ref|YP_349470.1| from Pseudomonas fluorescens Pf0-1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|77459963|ref|YP_349470.1|
Domain Number 1 Region: 53-602
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 1.3e-103
Family Phosphate binding protein-like 0.0004
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|77459963|ref|YP_349470.1|
Sequence length 623
Comment extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1]
Sequence
MTFMRNMAGLLLGSALLCNAAAALAGGSYAMTVYGEAPKYPAGFQHFDFVNPDAPKGGSL
SRASMEIGQYNYITPYADQGISVVQVNDWVYSPLAFRSLDEPYTVYGLVAQTMERDPDGL
WVRFNLNPEARFADGTPITAEDVRYTFELLMTKGSLSYRQQYADVQDVLIEGPRQIRFTF
KNNLNRTLALDLASLRPVPEHWWKTRDFANGGGFEPPLGSGPYRVSKVDAGRSISFQRDP
HWWGKDLPVSRGMYNFDSLTVNFYGDTDVARQLLQAGAFDYNREFSSSGYVVGYDSPALR
DGRLQQAILAPDKPTCAQGFVFNLQNPLFKDRRVRQALSLLWDFEWTNKQMMRGFYVRQN
SYWPKSEMAATALPDAGELAILEPLRGQIPDEVFSRVYQAPKTDGSGYIRDKQLQALKLL
AEAGWTPKNNRLVNAAGEPFEFTFLDGQGGFDRMLLPYKRTLAQIGITLNLRRIDSAQYI
NRLNARDYDMIVTSFPRSGDPIVSPGRELYSLYASQSATQVGSSNSMVLADPAVDRLIDG
LVQANTRDAMVRYARALDRVLQWGDYMIPNYYSKGTPTVFQNRFGRPPVQPIYSEGLDTW
WEVSAKPLTNQQMSALRQLAGGQ
Download sequence
Identical sequences Q3K9S5
205922.Pfl01_3741 gi|77459963|ref|YP_349470.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]