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Domain assignment for gi|77460241|ref|YP_349748.1| from Pseudomonas fluorescens Pf0-1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|77460241|ref|YP_349748.1|
Domain Number 1 Region: 283-434
Classification Level Classification E-value
Superfamily Lysozyme-like 6.19e-32
Family Bacterial muramidase, catalytic domain 0.0058
Further Details:      
 
Domain Number 2 Region: 46-271
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 2.26e-23
Family Phosphate binding protein-like 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|77460241|ref|YP_349748.1|
Sequence length 473
Comment lytic transglycosylase catalytic subunit [Pseudomonas fluorescens Pf0-1]
Sequence
MVRPSVLLLLCGSLLLPMTAVARLPGPLQAVPAAKVRDLTEIRSSRVLRVLVNQSRNSSG
EVQGQAIGIEYHRLRAFEQYLNGHARDGQEITLKIIPKAKDQLLGALQRGEGDLVAPGEL
LELQPGHAVASSEPIASNVPLVLVGIKGEKRYTKVEQLAGKTLALPTGSAAGEAVSQLNQ
KLALHKLAPIRIEWVDPTLAVEDVLEMVQGGIFHLTIVEQPIAERWGKILPKLRFDRQVM
ISEPGEEYWFVRRDASMLRASIDRFLTGYKKPSNEDAAFLRIYRRLYQVHYPLAKADRQR
LEKLRPTLQKHAEAQNMDWLNLAALAFKESALQPNARSGSGPTGLMQITPSAAQRVGVNN
IQNLDANVQAGAKYLAMIRRKFFNSPKLNERERMAFTLAAYNIGPERVQGMRAEARRRGL
NPNQWFFQVERIAMEQVGMGAVSYVNSVNKYYLAFDRERESLEPGGQKVVSRK
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Identical sequences Q3K8Z7
WP_011335318.1.2668 205922.Pfl01_4020 gi|77460241|ref|YP_349748.1|

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