SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|77458432|ref|YP_347937.1| from Pseudomonas fluorescens Pf0-1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|77458432|ref|YP_347937.1|
Domain Number 1 Region: 31-269
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 2.48e-30
Family Phosphate binding protein-like 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|77458432|ref|YP_347937.1|
Sequence length 337
Comment ABC transporter, periplasmic substrate-binding protein [Pseudomonas fluorescens Pf0-1]
Sequence
MTLPFKRSALTLLAASLAGALLGNTAQAEGKISIAQQFGIGYLILDVVRDQQLIEKHGKA
QGLDIKVDWNSISGATAMNEALLTGSLDVVSAGVPPMLTVWDRTKGKQNVKAIASLGSMP
NYLLTNNPNVKTLKDFSDKDRIAVPAAGVGFQSRTLQIETAKEFGNDHYKKFDDISVSLP
HPDATAALIAGGSEINAHFSSPPFQYQALQNPNVHKVLSSYDVLGGQATFNVLYTTEKFH
DENPKTYKAFYDALAEAEKIIKADKPAAAQAYIRVEQSKLPLALVEKIVTDPEIDFTVVP
QRTFIYAEKLQELGVLKNKADSWKDYFFEEAHGGAGS
Download sequence
Identical sequences Q3KE58
WP_011333633.1.2668 gi|77458432|ref|YP_347937.1| 205922.Pfl01_2205

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]