SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|77460164|ref|YP_349671.1| from Pseudomonas fluorescens Pf0-1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|77460164|ref|YP_349671.1|
Domain Number 1 Region: 40-267
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 3.14e-26
Family Phosphate binding protein-like 0.083
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|77460164|ref|YP_349671.1|
Sequence length 277
Comment periplasmic binding protein [Pseudomonas fluorescens Pf0-1]
Sequence
MHDRYFFGEWGVLKSSPIRMAAGLMLAALAALWVLPAPAAQVVRVGAAHFPPYTIRPENG
ADTGLLPELVAALNSAQSDYRFELVPTSIPRRFGDFKDGRTDMAIFENPEWGWKDIPHTT
VDMGLEDAEIFVAQNKPGRQQNYFADLKGKRLALYSGYHYEFANFNADPKYLAETYSATL
TYSHDSNLLMVLRGRADIALVTRSYLFDYLLRNEKVRDELLVSQRIDQIYHHYAILSPKA
PITGEAFGRLLQGLRDNGQMLKIFDPYKIAVVPVAHQ
Download sequence
Identical sequences Q3K974
gi|77460164|ref|YP_349671.1| 205922.Pfl01_3943

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]