SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|77461639|ref|YP_351146.1| from Pseudomonas fluorescens Pf0-1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|77461639|ref|YP_351146.1|
Domain Number 1 Region: 56-275
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 7.06e-45
Family Phosphate binding protein-like 0.044
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|77461639|ref|YP_351146.1|
Sequence length 356
Comment taurine ABC transporter, periplasmic binding protein [Pseudomonas fluorescens Pf0-1]
Sequence
MVFISLFLDRLALTQPRFVNPYQKGDAMMAKRALSSQFVTVCVSALISFSAHAANLTVGY
QTGIDPSKVPQADGVYEKTIGEKIDWRRFNSGPEVVTAIASGDVQIGNLGSSPLAAAASR
NLPIVAFIVSAQINAAEALVVRNGSGINKPEDLIGKTIATPFVSTSHYSLLGALKHWALD
TSKVKVVNLQPAEIAAAWKRGDIDGAFVWSPALGEIRKTGKTLTDAAQVGQWGAPTFEVW
VARKDFAEKHPEVVAKFAKVTLDSFADYAAHKDSWTADSVPVQKIAKLTGANAADVPELL
AGSAFPDAQAQQTTALLDGGTAKAIGETAKFLKEQGKVESVLPDYSPYVSAKFVAE
Download sequence
Identical sequences Q3K4Z9
205922.Pfl01_5418 gi|77461639|ref|YP_351146.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]