SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|26987609|ref|NP_743034.1| from Pseudomonas putida KT2440

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|26987609|ref|NP_743034.1|
Domain Number 1 Region: 20-358
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 7.76e-94
Family Phosphate binding protein-like 0.00000000493
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|26987609|ref|NP_743034.1|
Sequence length 359
Comment polyamine ABC transporter substrate-binding protein [Pseudomonas putida KT2440]
Sequence
MRTFLLAPLMLAASVASAAETVKIYNWSSYVAPDTLKNFQQASGIVPTYDVYDSNETLDG
KLMTGNSGYDVVFPSNHFMARQIQGKALKRLDKSKLPNWHNLNPVLLKALEVNDPGNQYG
FPYLWGSTGIGYNIDKVKAVLGDNAPVDSWDLIFKPEYMSKLKSCGVAVLDNGPELLPIA
LHYLGLPHHSQDPKDYEKAKDLLMKVRPYISYFHSSKYTGDLANGDICVVVGFSGDVLQA
KNRADEANNGVKVGYSIPKEGAPMWFDMVAMPVDAPDEKAGYAYMNYLLQPEVMANISNH
VQYANGNLKADGLVDPAMKGNTMIYPSDEVMGKLYALEAMPAKIDRIRTRIWTSIKAGN
Download sequence
Identical sequences Q88PH7
NP_743034.1.35174 WP_010952083.1.3142 WP_010952083.1.58218 WP_010952083.1.71439 160488.PP_0873 gi|26987609|ref|NP_743034.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]