SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for POPTR_0012s02070.1|PACid:18230031 from Populus trichocarpa v156

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  POPTR_0012s02070.1|PACid:18230031
Domain Number 1 Region: 4-91
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.000000000000353
Family B3 DNA binding domain 0.0046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) POPTR_0012s02070.1|PACid:18230031
Sequence length 124
Sequence
MAEFSKLLTKTDIHKRLSLPTKFFKPLPSLKGSHVRDFPAIDESGFGWTFQCSTRKKGHP
KPVLSKGWLAFVRHKELKAGDRVKFFKEKDQSGTATPFYRIEAEKEIKIFGVIFGYSPIV
APFP
Download sequence
Identical sequences B9I5A2
POPTR_0012s02070.1|PACid:18230031 XP_002318407.2.11743

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]