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Domain assignment for POPTR_0002s09050.1|PACid:18245253 from Populus trichocarpa v156

Domain architecture


Domain assignment details

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Strong hits

Sequence:  POPTR_0002s09050.1|PACid:18245253
Domain Number 1 Region: 123-236
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 9.68e-30
Family B3 DNA binding domain 0.0017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) POPTR_0002s09050.1|PACid:18245253
Sequence length 594
Sequence
MPQPQLTELSRVDPRFWRACAGSSVQIPAVNSRVYYFPQGHFEQSSSSTAPHPPFLTNLA
LSKPSIPCQISAVDFLADPVTDEVFTRLLLIPLDNPFSNLPLSFLEPCRSEGEGANDVDD
DERKILAFSKILTPSDANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLTVADIHGVSWDF
RHIYRGTPRRHLLTTGWSKFVNNKKLIAGDSVVFMRNLKGEMFIGVRRAVRFNNSARWRE
QVSDSGGDGKVKVEEGFSRSWRGRLSQEAVVEAVERAAKGLPFEVVYYPRAGWYSDFVVR
AEVVEAALRVFWTAGMRVKMAVETEDSSRMTWFQGTVSGTGLPDCGAWRGSPWRMLQITW
DEPEVLQNVKRVSPWQVEFVATTLPLQDASPPMKKLRYPNDSGFLTNGELFFPMSDLTNS
RTGHMNASMLNYSTFPAGMQGARQDPFSTFSLSNLISENASQVFGDKVFGNNLVPKMKRM
PSEMNIGSLQSGDLSPESQSSAHSFGKDFTGNRSFNPKKVGISSIQLFGKIIHMNQPVEN
GFDSVGFMDNSSKGCNETEGVNALELSLTSSYTELLNRIDVQCQSASAVEACSA
Download sequence
Identical sequences B9GUH0
POPTR_0002s09050.1|PACid:18245253 XP_002301020.2.11743

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