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Domain assignment for POPTR_0004s04970.1|PACid:18226157 from Populus trichocarpa v156

Domain architecture


Domain assignment details

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Strong hits

Sequence:  POPTR_0004s04970.1|PACid:18226157
Domain Number 1 Region: 148-273
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.7e-42
Family B3 DNA binding domain 0.0044
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) POPTR_0004s04970.1|PACid:18226157
Sequence length 709
Sequence
MVGMIDLNTTEEDETTPSSGSLSSPSSSSAASALSASGSGSGTSPVCLELWHACAGPLIS
LPKRGSIVVYVPQGHLEQLPDLPLGIYDLPPHVFCRVVDVKLHAEAASDDVYAQVSLVPE
SEEIEQKLREGVFEGDGEEEDVEATVKTTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCF
PPLDYTQQRPSQELVAKDLHGSEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLF
LRGEDGELRLGVRRAAQVKCGPTFPALWNQQLNQSSLADVANAISMRSAFRIYYNPRASS
SEFIIPFNKFLKSLDQSFSAGMRVKMRFETEDAAERRYTGLITGISELDPTRWPGSKWKC
LLVRWDDTEANRHSRVSPWEVEPSGSVSGSGSGSISSSNNSMAPGLKRSRSGLPSLKAEF
PIPDGIGASDFRVSSRFQEVLQGQEIMRSGIRGSIPTSENSFKGIGFNESYRFHKVLQGQ
EIFPRSPYRRIPNANKARENCGLGLSDGVQRSSSRNGWSTMMQGYNTQMRPPTQVSSPSS
VLMFQHASNQVSNPTSIFNSNDHEEQTTNTQSWFYPETHGGKFKLSSHSDPGLRGDSQCS
TNPYVLSHEHLQHGISQPVVAQSAFRSSQDMVLCKSSCRLFGFSLTEDRHVVNKEDNIAS
ITSPLNPESSFLPRVGEQLHPKPPAINNAVGSSCTKAILQHHAENYRIY
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Identical sequences B9H2P5
XP_002305105.2.11743 POPTR_0004s04970.1|PACid:18226157

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