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Domain assignment for POPTR_0004s07640.1|PACid:18226423 from Populus trichocarpa v156

Domain architecture


Domain assignment details

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Strong hits

Sequence:  POPTR_0004s07640.1|PACid:18226423
Domain Number 1 Region: 110-255
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 5.62e-49
Family B3 DNA binding domain 0.0067
Further Details:      
 
Domain Number 2 Region: 712-792
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.000000834
Family PB1 domain 0.03
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) POPTR_0004s07640.1|PACid:18226423
Sequence length 827
Sequence
MKLSTSGLGGQQAGEKKCLNSELWHACAGPLVSLPTAGSRVVYFPQGHSEQVAATTNKEV
DAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKETFLPMDLGMPSK
QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRH
IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLS
SDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYVKAVFHTRISVGMRFRML
FETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT
FPMYPSLFPLRLKRPWHPGSPSLLDSRDEASNGLMWLRGGSGEPGLPSLNFQANMLPWMQ
QRLDPTMLGNDHNQRYQAMLAAGMQNLGSGDPLRQQFMQLQQPFQYLQQSSSHNPLLQLQ
QQQQQQAIQQSIPHNILQAQNQISTESLPRHLLQQQLNNQPGDQAQQHQHIYHDGLQIQT
DQLQRQQSNLPSPSFSKTEYMDSSSKFSATNTPMQNMLGSLCSEGSVNLLDFSRAGQSTL
TEQLPQQSWVPKYAHQEVNAFANSISLPRTYPEKDPSMEAENCSSDAQNPTLFGANIDSS
GLLLPTTVPRYSTSSIDADVSSMPLGDSGFQNSLYGCVQDSSELLSNAGQMDPPTPSGTF
VKVYKSGSVGRSLDISRFSSYHELRGELAQMFGIEGKLENPHRSGWQLVFVDRENDVLLL
GDDPWELFVNNVWYIKILSPEDVLKLGEQGVEPSGPNAVHRMSGGVA
Download sequence
Identical sequences B9H3I2
XP_002305917.2.11743 POPTR_0004s07640.1|PACid:18226423

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