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Domain assignment for POPTR_0010s23000.1|PACid:18240058 from Populus trichocarpa v156

Domain architecture


Domain assignment details

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Strong hits

Sequence:  POPTR_0010s23000.1|PACid:18240058
Domain Number 1 Region: 145-261
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 3.92e-30
Family B3 DNA binding domain 0.0016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) POPTR_0010s23000.1|PACid:18240058
Sequence length 706
Sequence
MFEAKLRDCSSQILQIPKLQSGPMIREFAVMNSQKEKMRVAEKCLDSQLWHACAGSMVQM
PAVNSKVFYFPQGHAEHAQGSVEFGHFQIPALIPCKVSAIKYMADPETDEVYAKIRLIPL
NNSDLMLGHGCGEDNDDRLHSGNESQEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPR
LDYTAEPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLR
AENGDLCVGIRRAKRGIGGNECSSGWNSFAGYSGFFREDESKLMRRNGNGDMKGKVKAES
VIEAASLAANGQPFEAVYYPRASTPEFCVKASAVRSAIQIQWCPGMRFKMAFETEDSSRI
SWFMGTISSVQVADPIRWPNSPWRLLQVAWDEPDLLHNVKRVSPWLVELVSNMPAIHLSP
FSPPRKKLRLPQPPDFPLLGQIPMPSFTGNPLRSNSPLCCVSDNIPAGIQGARHAQFGLS
SSDLHFNKLQAGLFPVDFQRLDRAAPPSRISNSNFVGNTQNSESISCLLTMGNSSQSMKG
SDTKTPHILLFGQLIVTDQQSSQSCSGDTNANSSSDGHPGKAISDGSGSASQQNGPLENS
SGGRCPWYKDYQKTDPGLETGHCKVFMESEDVGRTLDLSVLGSYEELHRKLVNMFGIESS
EMLSNVLYRNAAGTTKHAGDEPFSEFLKTARRLTILSDASSDNVGR
Download sequence
Identical sequences B9HUF7
XP_002316370.2.11743 POPTR_0010s23000.1|PACid:18240058

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