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Domain assignment for POPTR_0013s15330.1|PACid:18221640 from Populus trichocarpa v156

Domain architecture


Domain assignment details

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Strong hits

Sequence:  POPTR_0013s15330.1|PACid:18221640
Domain Number 1 Region: 228-333
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 5.36e-21
Family B3 DNA binding domain 0.0012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) POPTR_0013s15330.1|PACid:18221640
Sequence length 774
Sequence
MQSDEIPNGFSFLARNNAGDSESIPAENTVAGNSNDEGGLAQLCRLLEANEPSLLHPSKR
ANTNGGLGQFRQEEIMHAIGDIGTGFSNVTQPSIGSPKFSKPNNTSSLLDLRDMHSSLSQ
PSLSMALGAPSGTTNFVTFPDGAVEGKEQRKTPSSFQQGQRSRPILPKPSKPGLSVSSEN
NIGAASELRIARPPAEGRGKNQLLPRYWPRITDQELQQLSGDLNSNIVPLFEKILSASDA
GRIGRLVLPKACAEAYFPAISQSEGIPLRIQDIKGREWTFQFRFWPNNNSRMYVLEGVTP
CIHSMQLKAGDTITFSRIDPGGKLVMGFRKSTNNDEDTQASGLLDGTASGETSFSGTVET
LLTDPYQNALSKRLKLADGDIGWNNSENHRGRINGDLLQQTTAPTEKKRTQNIGPKSKRL
FMHSEDAMELRLTWEEAQDLLRPPPSVKPTIVTIEDHEFEEYDEPPVFGKRTIFTSRSSG
GQEQWAQCDDCSKWRNLPVDALLPPKWTCSENAWDSSRCTCSAPEEMTSKDLDNVLGVSK
DFKKRRNLRSQKRFQERESSGLDALATVAVLGDNLDDSGDPSVGATTKHPRHRLGCTCIV
CIQPPSGKGKHKPTCTCNVCMTVKRRFKTLMLRKKKRQSEREAEISQKDNMDHKEESEMN
GTMSHEVLHINNPDTEGNQSQRQIEKPETSAGQIDLNCHPNSEDTSLEIPGLSTMNLVDT
ANSPLDNYIKQNGLSSFVWDHQGGPAQKSGESLRRLSDEAFLASIGWTHESIRD
Download sequence
Identical sequences B9I6X8
POPTR_0013s15330.1|PACid:18221640 XP_002319970.2.11743

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