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Domain assignment for gi|56468849|gb|EAL46657.1| from Protozoadb 2010_08

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|56468849|gb|EAL46657.1|
Domain Number 1 Region: 194-284
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 3.36e-17
Family Canonical RBD 0.0062
Further Details:      
 
Domain Number 2 Region: 301-340
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000000000000744
Family Retrovirus zinc finger-like domains 0.001
Further Details:      
 
Domain Number 3 Region: 343-369
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00000454
Family Retrovirus zinc finger-like domains 0.0049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|56468849|gb|EAL46657.1|
Sequence length 391
Comment zinc finger protein, putative [Entamoeba histolytica HM-1:IMSS]
Sequence
MSLKTPKNFKVIDVSDTESDSESSYEKHEIAKPEIKEEKEKKEEHKHSKKDKKEKKKDKK
EKKKEKDNDKEEEQKEKNTTEVTKMEEDTKEEIAKDEKEQEKNEKEESVNDKKEEQVKKE
QVKEEQVKEEQVKKEECHEEEQEELVNDKKKEEIKEEEKTQKKEIKKEEPQEEEVLKRNK
KTVKQEEKDKQKKDEGKKYISVCVQGIPKQWNTRKFREEFGDYNIAKCRIITFKGKSESR
GFGYLDFFNVNEAQRCIDEMTGKEFEGRAVYLEYANTKKKGYRHGDTSTPETASLNKSIQ
KVCFKCGKPGHIGRDCSQPDDKVCFHCGKLGHIGKNCPEQEVPESSDQVTCYKCGQVGHK
SVDCPENTEGGFKRKSNDNTEDTGKHIRFDD
Download sequence
Identical sequences A0A175JVA5 C4M7A6 M3UV33 M7XAZ5 N9TKG8
jCVI|EHI_055640 XP_652045.1.49425 294381.C4M7A6 gi|56468849|gb|EAL46657.1| gi|67472483|ref|XP_652045.1|

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