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Domain assignment for jgi|Phypa1_1|124935|e_gw1.52.133.1 from Physcomitrella patens

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|Phypa1_1|124935|e_gw1.52.133.1
Domain Number 1 Region: 1-170,1061-1160
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 5.33e-50
Family ABC transporter ATPase domain-like 0.0002
Further Details:      
 
Domain Number 2 Region: 487-683
Classification Level Classification E-value
Superfamily Smc hinge domain 2.88e-43
Family Smc hinge domain 0.00067
Further Details:      
 
Weak hits

Sequence:  jgi|Phypa1_1|124935|e_gw1.52.133.1
Domain Number - Region: 784-883
Classification Level Classification E-value
Superfamily Myosin rod fragments 0.000118
Family Myosin rod fragments 0.0035
Further Details:      
 
Domain Number - Region: 248-485
Classification Level Classification E-value
Superfamily Tropomyosin 0.00477
Family Tropomyosin 0.0015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) jgi|Phypa1_1|124935|e_gw1.52.133.1
Sequence length 1208
Sequence
MYIKEICLEGFKSYATRTTVTNFDPVFNAITGYNGSGKSNILDSICFVMGITNLQQVRVA
NLQELVYKQGQAGVTKATVSIVFSNADKSRSPIGYEEHDEITITRQIVVGGRNKYLINGH
LAQPSKVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPQETLSMLEEAAGTRMYEMKKEG
ALKTLEKKQMKVDEIDNVLNHDILPALEKLRKERAQYMQWSSGNGQLERLKRFCIAYQYS
SADQVKNSALSEISDRKSKIAELQEEYFKIEAGVTEMEGKIAAMTEEKEKHMSSDFKVLS
EMVDKLSKELVKVGSAVNNQKDSLEVEKKSVAKSQKALCELEKGVAEKDDAVRQFEEDAS
AFTQKVESLTTRLAEREADYQGVQAGKSSGGDQKSLADQLVDANTAVGKAATEVKQSKMK
IKHLEKELKEKRTQLSSKQKEATSIEKEHEMRTVEVKKITSALQSLGFDEERMTKLDKAR
GDEIEIVRKLKADVSTLTGELNGVQFSYNNPSRDFDRSKVKGVVARLLKVKDPSTMTALE
VTAGGKMFNVVVDSEQTGKLLLEKGGLQRRITIIPLNKIQASGVPERALAAAKKLVGPKN
ARTALSLVGYEEEIEAAMAFVFGGTFVCTDMDTAKQVAFHKDVMTRSVTLEGDIFEPRGL
LTGGSRKGGGELLKRLHALAEAEAILAQHTQNLSEIESEIASLAPVQKKFLELKSQLELK
TYDLSLFEGRAEQSEHHKLAEVVATMTAELDTEQAELVKKETDHKECLNSVSTLSEAINN
HGRDRENRLIALEKEIKSLKKELASVSKEFKTQEAARERLIMEKDLAIEEMQTLNAEISA
MEAQIKVLVDTLGQMESKVTSLDAIESEFTKANGELTKNREKMKACDNQISALIKEQAAR
KQELTDCLLSQKRLDNEVKRMEREQLDCRKTVEKLQETHPWIATVKQLFNQPGTEFDFST
RDYDSARQELDALQTEQKNLEKRVNKKAEAMFVQAEKDYIDLLDKRRIVEADKAKIQKVI
HELDEKKKEVLEGTWKSVTKDFGKIFSTLLPGTTAKLEPPEGASFLDGLEVKVAFGGVWK
QSLSELSGGQRSLLALSLVLALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKEHFPHSQ
FIVVSLKEGMFNNANVIFRTKFVDGVSTVTRTVPGGRQVLSKSQRPTLEETSQGMNLCPL
SLVFTSYK
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Identical sequences A9S6L3
XP_001762053.1.60028 jgi|Phypa1_1|124935|e_gw1.52.133.1 3218.JGI124935

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