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Domain assignment for jgi|Phypa1_1|164784|estExt_fgenesh1_pg.C_770002 from Physcomitrella patens

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|Phypa1_1|164784|estExt_fgenesh1_pg.C_770002
Domain Number 1 Region: 21-161
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 1.17e-19
Family Calponin-homology domain, CH-domain 0.004
Further Details:      
 
Domain Number 2 Region: 416-461
Classification Level Classification E-value
Superfamily LysM domain 0.00000222
Family LysM domain 0.0054
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) jgi|Phypa1_1|164784|estExt_fgenesh1_pg.C_770002
Sequence length 532
Sequence
MEEPTTPVGHNASTSHFRESDVEFLRASAKEWLEAVLDEDLDDGTSLEDLLADGTVLYRA
AQHIRDDDKFPGHGESSSFHVHGTPGGDRKSSLRYQPYPYVETFLNVCREVGLKDLDVFV
PSDAVEKKDIRRVCVCLRRLSKKGRSLGIQVPDFDNVKDTLATPRSKMSREAVQKTRESL
QQSSSRSTPKSSANGQVSRETSSSIAELRKDDADGVSSKPSVIVETYNKVHHDLGSGAEG
REPAATGSNQKVKAAEAGAGASDAADRERVSGGEVAKDRVDRSGDASAPEPAVVSKVLRE
VRSGSEAVSSLAPKPAVEGKAGAKGGEKPLAKAEETRGEEAQWKATGGSEKGELSGKAGA
GGGKGDGGGRVEGGLVWVAALGGVAAIAAGVAGAMFLRRGRHEGDRSGSNGCSGGVYEVK
KGDNLWKIARGSGGKDWREIAARNPSIGNPDLIYPGEQLKLVQIVSSIELNREHDDCETR
LCSVHMNEVCLFSRCILFGCASFVQHRHDIRDSTLVGCALLVPSCYVSRGGD
Download sequence
Identical sequences A9SGN1
3218.JGI164784 jgi|Phypa1_1|164784|estExt_fgenesh1_pg.C_770002 XP_001765515.1.60028

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