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Domain assignment for jgi|Phypa1_1|70276|fgenesh1_pg.scaffold_27000105 from Physcomitrella patens

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|Phypa1_1|70276|fgenesh1_pg.scaffold_27000105
Domain Number 1 Region: 103-188
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 5.89e-17
Family B3 DNA binding domain 0.0073
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) jgi|Phypa1_1|70276|fgenesh1_pg.scaffold_27000105
Sequence length 1059
Sequence
MEVAVDVDATEYPGYISCMFCTARCFKLHASHGAVKASSKVCAGSGSSRSRESLQAGAQK
NSSNRKHRAPFFVKTVKITTVRKKNCELKEGQAVLLTDMPFKCAQHLPAFFFKDYGDMFQ
KFVLLQGPSGQVWPVNLCVSCGSTTGRPTVRFSRGWKEFAHDHHLELGDKLIFTLASFSR
FSVQVFDPLGKKKQTSSTAVSGWSFRREDLMDDEISRKKKSIFVNWQNKIVRESTPVLGG
NDVSKKSAVAGNGHASRMAMLCRHLKQENKKMEKRNALIAKFRTRSQEKSIPLSLLGQKV
SLGSGSASSSDSDGSFYLNDEQDYDTKLLDWEPLEIASPSRIWPLAFNSNDSSTAIVTAQ
QQNSVVDSRTQPVNLSRTSSPSSPTSSKFHGGLENSEQGQCRSNIVDRLEDEKDLLQACW
KRNLKSTTSTAWPSGEMRHDVQPSPRSHVFNVRPISALEGPHEIDAVCTPLSPTLSLSHY
LESSSPEAVQSRHGPESRQLQQRFSFSNQDLAVRNHSDYRGHRTRDCSDNSGSVSEDLTL
QSIHAQSAKIPIGGISNSSNRSSVTIEKCTHWSRIPLENRQVRLFDSAHGIKSSRVKETN
VPSSKNLSSDLELRTQSSSKMPLNSLKPTSSRNDLSLAYFLNQPRPNARRQSHGEERIAA
DQFTGGTCTDAKGSISQREVDHVVTTMGPSLQKTQKIVSFTDALPSGAVSLQNPLDVRSS
DKSNVCRNETTLRVEKAGQMQRPAELPETKTARCCANENFNICTTSSESKENIPTEIPAS
IGPLVVFNSSARVENFPNEVDRFQQKELGLTSKRGGKENIKSSTKRNRTENRVAPLVLTD
HNRNPHHQKMTTITNVCANSPTKENKPALPHRKDVGITEYLEQKRIARKTRPRLKKKPTP
GVSNVAVSQIKAVFTTEDIKPFVNASSNFQLDSSSRIRSQINASNSRKTTPMEEKVQKLG
GTFGGMERAQTSHMKSSIGNRCDLVELDSIASEDNEDSAGGDIFEVEESWDTWREIIRQR
DAASSHHLRTPVCVQPLLKGEAQTKMRTMDIDSAFDKQQ
Download sequence
Identical sequences A9RTB0
3218.JGI70276 jgi|Phypa1_1|70276|fgenesh1_pg.scaffold_27000105 XP_001757398.1.60028

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