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Domain assignment for jgi|Phypa1_1|100554|fgenesh1_pg.scaffold_429000009 from Physcomitrella patens

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|Phypa1_1|100554|fgenesh1_pg.scaffold_429000009
Domain Number 1 Region: 135-178
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0000977
Family Retrovirus zinc finger-like domains 0.0024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) jgi|Phypa1_1|100554|fgenesh1_pg.scaffold_429000009
Sequence length 299
Sequence
MFVKESQPVMVAASLVRTKVWEECHYDQLLMVGTTMIPNVGNQVLMTNTMIGSYPRMIAP
SMGNPNSQGVVNATPLQAIPPVATYPSPMAYRQPEVPMNAIINDSNEALLLNLMKEMEEL
AVHMTKDEEKRHKPSNMRPNVWCNNCKGQGHFDTECPSPHQKMGQCMYCGGKHNTANCWY
LLRQQTMILPTVWDGPTHDINSANYRRNKQTTGILGTSGGSDSRSIDKKSAKRQRTNSNI
GEIDTSPGQQTNTKICSIIGRSVTVTTQFDQYIGASTNFTSTNITPIRWTVTPIKGSNF
Download sequence
Identical sequences A9U211
XP_001784891.1.60028 3218.JGI100554 jgi|Phypa1_1|100554|fgenesh1_pg.scaffold_429000009

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