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Domain assignment for jgi|Phypa1_1|80205|fgenesh1_pg.scaffold_84000115 from Physcomitrella patens

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  jgi|Phypa1_1|80205|fgenesh1_pg.scaffold_84000115
Domain Number - Region: 283-307
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0785
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) jgi|Phypa1_1|80205|fgenesh1_pg.scaffold_84000115
Sequence length 710
Sequence
MRPDLVRQSNVDQFRELPETYRLGQKGLWQVVEGHPYRFTVYSCSRLYSNSQKPIDCLNI
GESPYYLLQPDVRNSKAMIEKEALATKALYLRCYVREMELNRVSEKKMVELFGLAMIPEI
RDHITSITDRYGNSWEIFLHALKDEYFLEDADRVEKLTLEPNKVDLFLQAVDGELQGKLE
LLLEDKEEDEGLTTKWKNVEDAVGLLAKRERRKDRSNIPKTIQAPKAPVRTTPPTMPTVQ
SSTSFSKKADMRMKEIIRRMRDLQIELTRLEQNTSTNNLKNVSKQGYVQRCIWCDDASHT
RKDCNEFNNMIRQGIIYWKDGKIALKDREDLLQTNFGKGGMRALVQDYLKEHETATRESA
SYGARVDDDLGGRMETSWKDLVESLSVHAYIAKSQHKALMEEKRRGNFDDTREGNSSKRQ
TRGDKAREETKDKGKSIAYKLLSDIEAATNLKGVLEERILNAKVEFTLKEVLEIIKKEFH
DVIIDSIKQKRQLMGKTRMSHAIDARIYKDEEEVDIGYKQPTNEKNGYNQRVRFEDYSDK
EMEALSHYTRKHWARATTEVLLKAIRAANNTRGELYGACPDVKIRIGDVATEQHFFVQDM
SYLLILGQPYIMATRMETKVLDDGTLQDDERILVVYEENGLKDSLELITSIGLGDNDKII
EIHSREVYTILESFQAPEVTVETRYKTTDKKVKPVAGLLPEDSKEQMGEA
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Identical sequences A9SJC6
jgi|Phypa1_1|80205|fgenesh1_pg.scaffold_84000115 3218.JGI80205 XP_001766412.1.60028

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