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Domain assignment for jgi|Phypa1_1|80483|fgenesh1_pg.scaffold_87000006 from Physcomitrella patens

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  jgi|Phypa1_1|80483|fgenesh1_pg.scaffold_87000006
Domain Number - Region: 389-484
Classification Level Classification E-value
Superfamily Acid proteases 0.00197
Family Retroviral protease (retropepsin) 0.036
Further Details:      
 
Domain Number - Region: 148-188
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0167
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) jgi|Phypa1_1|80483|fgenesh1_pg.scaffold_87000006
Sequence length 624
Sequence
MEVFPHALKDEYFLEDVDHVTKKLFLEWIERPNKNLQATELLREFERQYSQLSKVEKLTL
EPNKVDLFLQAADGELERKNDRSNILKTIQAPKAPVRTTPPTMPTVQPSTSLSKKADMGM
EEIIRGMRDLQIKLARLEENTSINNSKNVSKQGYVQRCIWCDDASHTRKDCNEFNNMIWQ
GIICWKDGKIALKNREELLQTNFGKGGMRALVQDYLKEHETAARESTSYGARVDDEIGGS
TETSEFWASAVSTMQEGKLPREALLGTATIIRGRTGWEDPVESLSVHAYIAKSQHEALME
EKRRGNFDDTREGNSSKRQTRGDKAREAASQELPVKDTSASLEEKTKETKDKGKSIAYKL
LSDIEAATNLKGVLEERILNAKARATTEVLVKVGDIEEPIVALVDHGSEINLMSKDLYKK
PKWPIDMEHGWTIRAANNTQGELYGACPDVKIWIGDVATEQHFFVQDTMSYPLILGQPYI
TATRMETKVPEDGSAYARVCSQDGRKVVQFLTVPPNHERNRDRLREKPLPKIVEGFKDFG
KLGTLQDDERILGVYEENGLEDSLELITSIGLGDNDKIVEIHSREVYTVLESFQAPEVTV
ETRYKTVDKKVKPVAEPLPEDSKE
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Identical sequences A9SK44
XP_001766783.1.60028 3218.JGI80483 jgi|Phypa1_1|80483|fgenesh1_pg.scaffold_87000006

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