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Domain assignment for gi|518657017|ref|YP_008143379.1| from Bifidobacterium animalis subsp. lactis Bl12

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|518657017|ref|YP_008143379.1|
Domain Number 1 Region: 4-258
Classification Level Classification E-value
Superfamily Thiamin diphosphate-binding fold (THDP-binding) 1.11e-49
Family TK-like PP module 0.021
Further Details:      
 
Domain Number 2 Region: 284-451
Classification Level Classification E-value
Superfamily Thiamin diphosphate-binding fold (THDP-binding) 1.48e-29
Family Branched-chain alpha-keto acid dehydrogenase Pyr module 0.036
Further Details:      
 
Domain Number 3 Region: 482-614
Classification Level Classification E-value
Superfamily TK C-terminal domain-like 5.37e-20
Family Transketolase C-terminal domain-like 0.049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|518657017|ref|YP_008143379.1|
Sequence length 615
Comment 1-deoxy-D-xylulose-5-phosphate synthase [Bifidobacterium animalis subsp. lactis Bl12]
Sequence
MTHDLLSQVLSPSDVKLLDPTQLDALCAQIRETLVEYGKRYGGHIGSNLGLVEACVALHV
VFESPLDKIVFDVSHQSYVHKMLTGRAEAFRRAELFGTVTGFTNPGESEHDHFVLGHTGT
SISLACGMAKERDMVRAAGGTAQTNNVIAVIGDGALSSAIAFEGLNNAAEQGGNMIILVN
DNEMSIAENHGGMYATLAAMRESHGRGERNLFRDFGLDYRYVEHGNDVHELIRAFEEVHG
IDHPVVVHIHTTKGLGLDAEDAAQGVCEGRCEANHWQNPLSRADSSLGARKYYGGLAMAS
LERRFATEPGLVVISPATPGSNGITQDFRERAGAHYVDTGITEEHAVAFASGIAKAGGRP
VVATSATFFQRTFDQLQQELALNDTPVTLLSFGAGLSDADNTHSGAFDIAMFGNIPGLTC
LAPTSRRMFLDMLGWSTSARNTHPVVIRVPGDTILKDERAGELDPEASLAPQKTDLLKPW
FGYDVVSDGTDVAVLGLGNAFATAHAVVERLADSSPAIAATLINPLQFSSLDEQTLRSLA
EDHRVVVTLEDGQLEGGWGEKITAFYANMMPDCTMRVLNFGADKEFTDRTPLAELNSRYG
MTVESICSRIHGLLD
Download sequence
Identical sequences B8DTS9 D3R4E1
gi|241190630|ref|YP_002968024.1| gi|219683601|ref|YP_002469984.1| gi|387820499|ref|YP_006300542.1| gi|241196036|ref|YP_002969591.1| gi|384190877|ref|YP_005576625.1| WP_004218838.1.14456 WP_004218838.1.20477 WP_004218838.1.22654 WP_004218838.1.23267 WP_004218838.1.23846 WP_004218838.1.23969 WP_004218838.1.26294 WP_004218838.1.34099 WP_004218838.1.38287 WP_004218838.1.38998 WP_004218838.1.45260 WP_004218838.1.45775 WP_004218838.1.47471 WP_004218838.1.47549 WP_004218838.1.50484 WP_004218838.1.53490 WP_004218838.1.62237 WP_004218838.1.66072 WP_004218838.1.75174 WP_004218838.1.78909 WP_004218838.1.86686 WP_004218838.1.86797 WP_004218838.1.94304 gi|518657017|ref|YP_008143379.1| gi|384193629|ref|YP_005579375.1| gi|384195188|ref|YP_005580933.1| gi|387822172|ref|YP_006302121.1| gi|384192021|ref|YP_005577768.1| 442563.BLA_1120 555970.Balat_0588 580050.Balac_0588

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