SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|429193221|ref|YP_007178899.1| from Natronobacterium gregoryi SP2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|429193221|ref|YP_007178899.1|
Domain Number 1 Region: 81-224
Classification Level Classification E-value
Superfamily Ribonuclease H-like 0.000000000854
Family Retroviral integrase, catalytic domain 0.028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|429193221|ref|YP_007178899.1|
Sequence length 228
Comment transposase [Natronobacterium gregoryi SP2]
Sequence
MLVQLANLLKETVDVDCDEVWENERTQTPVRVFGVRLHSMGLSVREVVAVLEFLGIGRSH
GAVWNWTHKLWEAQSDPPTAASSRVAVDEKQIEVDGKTKWLYATIDTESKLLLEIDVFSR
RGTDPAAAFLHRLIEKHEIGDSEFLVDAGGYLTPLARHDLSGQLNYSNRNHVEKWVQTVP
MQIDRFHSFWRGSPTSARRWLRRFRHHYNHDRPNQALDGRTPAEEVLN
Download sequence
Identical sequences L0AMZ2
gi|429193221|ref|YP_007178899.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]