SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|429193602|ref|YP_007179280.1| from Natronobacterium gregoryi SP2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|429193602|ref|YP_007179280.1|
Domain Number 1 Region: 117-402
Classification Level Classification E-value
Superfamily Ribonuclease H-like 6.9e-25
Family Transposase inhibitor (Tn5 transposase) 0.019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|429193602|ref|YP_007179280.1|
Sequence length 439
Comment transposase family protein [Natronobacterium gregoryi SP2]
Sequence
MYNPPDSVVVNRIQRAFPSDELRERARATNLIQRERKLDVVGLFYTLSLGFAAGSDRSIQ
AFLERYVEMADCDELSYATFHGWFKPGFVALLREILDDAIENLDTGQTELTGRLKRFRDV
LIVDATVISLYQDARDVYALDDDRAGAKLHLTESLSTGLPTRFQTTDATTHERSQLPTGE
WVAGALILFDLGYYDFWLFDRIDANDGWFVSRVKDNADFEIVEELRTWRGNSIPLGGQSL
QAVLDDLQRQEIDVQITLSFDRKRGSGASATRTFRLVGVRNDDSGEYHLYLTNLDRDDYR
APDIAQLYRARWEIELLFKELKSRFGLDEINTTDAYIIEALIIMAALSLLMSRVIVDELQ
KLDAKQRDCADDAEASSTRLPRRRCSHAVERHAHLIQLYLMLDLGYELPDLDSVLLWSSR
DPNPHRPRLREQVESGEFW
Download sequence
Identical sequences L0AM09
gi|429193602|ref|YP_007179280.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]