SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|427711212|ref|YP_007059836.1| from Synechococcus sp. PCC 6312

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|427711212|ref|YP_007059836.1|
Domain Number 1 Region: 130-347
Classification Level Classification E-value
Superfamily Glutathione synthetase ATP-binding domain-like 8.37e-54
Family ATP-binding domain of peptide synthetases 0.00012
Further Details:      
 
Domain Number 2 Region: 3-129
Classification Level Classification E-value
Superfamily PreATP-grasp domain 6.14e-34
Family D-Alanine ligase N-terminal domain 0.00029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|427711212|ref|YP_007059836.1|
Sequence length 352
Comment D-alanine--D-alanine ligase [Synechococcus sp. PCC 6312]
Sequence
MSRIKVGLVFGGRSGEHEVSIISAQAIAKGLITPPNTDKYELVPFYIGKNGAWSAPNIAT
SILATGQPLSVTDTTTPNLWQFPPQVSEIDVWFPILHGPNGEDGTIQGLFKLVQKPWVGS
GVAASAVGMDKILMKAVFAAAGLEQVAYLPVNRSEIWSDPCVYSHLCDQIESTLGYPCFV
KPANLGSSVGITKVKNRDQLTTALDNAASYDTRIIVEAGVIAREVECAVLGNDRPQASVI
GEITYSSEFYDYETKYTDGRANLLIPANLPPAVVEQIQAMSIKAFKAIGASGLARMDFFY
LEATGEILINEVNTLPGFTALSMYPQLWLKSGLAFPDLVDELVRLALARGAS
Download sequence
Identical sequences K9RP95
WP_015122837.1.5248 gi|427711212|ref|YP_007059836.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]