SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|427711429|ref|YP_007060053.1| from Synechococcus sp. PCC 6312

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|427711429|ref|YP_007060053.1|
Domain Number 1 Region: 5-354
Classification Level Classification E-value
Superfamily Nucleotidylyl transferase 7.24e-107
Family Class I aminoacyl-tRNA synthetases (RS), catalytic domain 0.00000004
Further Details:      
 
Domain Number 2 Region: 356-521
Classification Level Classification E-value
Superfamily Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 3.36e-37
Family Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.00029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|427711429|ref|YP_007060053.1|
Sequence length 529
Comment methionyl-tRNA synthetase [Synechococcus sp. PCC 6312]
Sequence
MSAGPTRFALTTPLYYVNDLPHIGSAYTTIAADVLARFYRLQGTEVLLITGTDEHGQKIQ
RTAEKLDRSPQAHCDQIAAGFQDLWQKLDIHYDRFSRTTDPRHTQIVEEFFQRVWAKGDI
YLGQQQGWYCVDCEEFKEERDLLPNKHCPIHINRPVEWRDERNYFFRLSHYQDALLAHYQ
ACPDFIQPTSRRNEVLSFVGRGLQDFSISRVNMNWGFPIPVDPSHTIYVWFDALLGYVTA
LLEPDQAPTLENALAKWWPINLHLIGKDILRFHAVYWPAMLMSAGFPLPHRVFGHGFLTK
DGQKMGKSLGNTLNPYELIANFGADAVRYYFMKEIEFGRDGDYAETRFINTVNADLANDL
GNLLNRTLKMAGKYCQAKVPEINVVSLSPEHPLVIWGKTAGETVNNAYGDLNFTLVCQTA
LNLARTGNKYLDDQAPWSLYKKGALEQVAEILYTVLEAVRLAAYLLAPIIPNTASKIYQQ
LGYSIDFNHPETLHYLESHQTWGILRPGQALAPPEPVFQKLVAPETPAA
Download sequence
Identical sequences K9RNI7
WP_015123054.1.5248 gi|427711429|ref|YP_007060053.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]