SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|427713984|ref|YP_007062608.1| from Synechococcus sp. PCC 6312

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|427713984|ref|YP_007062608.1|
Domain Number 1 Region: 128-401
Classification Level Classification E-value
Superfamily Glutathione synthetase ATP-binding domain-like 4.95e-106
Family BC ATP-binding domain-like 0.00000000907
Further Details:      
 
Domain Number 2 Region: 697-958
Classification Level Classification E-value
Superfamily Glutathione synthetase ATP-binding domain-like 7.25e-104
Family BC ATP-binding domain-like 0.000000203
Further Details:      
 
Domain Number 3 Region: 396-551
Classification Level Classification E-value
Superfamily Carbamoyl phosphate synthetase, large subunit connection domain 1.57e-52
Family Carbamoyl phosphate synthetase, large subunit connection domain 0.00011
Further Details:      
 
Domain Number 4 Region: 1-127
Classification Level Classification E-value
Superfamily PreATP-grasp domain 3.74e-50
Family BC N-terminal domain-like 0.00000209
Further Details:      
 
Domain Number 5 Region: 574-699
Classification Level Classification E-value
Superfamily PreATP-grasp domain 2.01e-45
Family BC N-terminal domain-like 0.000003
Further Details:      
 
Domain Number 6 Region: 961-1097
Classification Level Classification E-value
Superfamily Methylglyoxal synthase-like 4.32e-34
Family Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain 0.00063
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|427713984|ref|YP_007062608.1|
Sequence length 1098
Comment carbamoyl-phosphate synthase large subunit [Synechococcus sp. PCC 6312]
Sequence
MPRRTDLKKILLIGSGPIVIGQACEFDYSGTQACKALREEGYEVILINSNPATIMTDPET
ADRTYIEPLTPEIVEKVIAKEQPDAMLPTMGGQTALNLAVSLAKSGVLEKYGVELIGAKL
PAIEMAEDRKLFKEAMARIGVPVCPSGLAETMAESKAIAHQIGSYPLIIRPAFTLGGTGG
GIAYNQEEFEEIAASGLDASPVSQILIEQSLIGWKEYELEVMRDLADNVVIICSIENIDP
MGIHTGDSITVAPAQTLTDKEYQRLRDASIKIIREIGVETGGSNIQFAVNPDNGDFIVIE
MNPRVSRSSALASKATGFPIAKMAAKLAVGYTLDEIPNDITRKTPASFEPTIDYVVTKIP
RFAFEKFPGSQAVLTTQMKSVGEAMAMGRTFQESFQKALRSLETGRAGWGCDQAEKLPSL
EHIRANLRTPNPDRILTVRQAMLMGMTVEDIYELTAIDPWFLHEFQELLETEKFLKRKAL
TQITADEMWTVKQQGFSDRQIAYATKSTEDQVRAYRKSLAVIPVYKTVDTCAAEFEATTP
YYYSAYERPTQRVNLESGQVETIAPDSEVLPATKPRVMILGSGPNRIGQGIEFDYCCCHA
AYALSADGYETIMVNSNPETVSTDYDTSDRLYFEPLTKEDVLNIIEVEKPVGVIIQFGGQ
TPLKLAVPLQAYLNQQGPEGTTKIWGTSPDSIDIAEDRERFERILRELDIPQPANGLARS
FNEALAVAQRISYPVVVRPSYVLGGRAMEIVYSDSELERYMTYAVLVEPDHPILIDKFLE
NAIEVDVDAIADAQGNVVIGGVMEHIEQAGIHSGDSACSLPPQTLSPQVLETIRAWSVSL
AKALNVIGLMNLQLAVQGDQIFMIEANPRASRTVPFVSKAIGIPLAKIAARLMSGKTLAE
LGLTAEKIPNHVAVKEAVLPFEKFAGTDTLLGPEMRSTGEAMGIDVDFGQAFAKSQLSAN
QKLPLSGTVFVSMSNRDKKAIAPVIKDLQALGFQVLATEGTRAALLDSGLENIELVLKLH
EGRPNVLDAIKNQQIHLILNTPSGEEAQADGRLIRRSALTYKIPMVTTIAGAKATAAAIK
ALQTNPLQVKAIQDYHSS
Download sequence
Identical sequences K9RVU1
WP_015125607.1.5248 gi|427713984|ref|YP_007062608.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]