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Domain assignment for gi|384209630|ref|YP_005595350.1| from Brachyspira intermedia PWS/A

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|384209630|ref|YP_005595350.1|
Domain Number 1 Region: 291-587
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain III 2.75e-77
Family DNA repair protein MutS, domain III 0.00000618
Further Details:      
 
Domain Number 2 Region: 590-823
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 4.54e-59
Family ABC transporter ATPase domain-like 0.000000606
Further Details:      
 
Domain Number 3 Region: 12-119
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain I 7.72e-43
Family DNA repair protein MutS, domain I 0.0000296
Further Details:      
 
Domain Number 4 Region: 118-290
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain II 7.72e-30
Family DNA repair protein MutS, domain II 0.0013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|384209630|ref|YP_005595350.1|
Sequence length 887
Comment DNA mismatch repair protein MutS [Brachyspira intermedia PWS/A]
Sequence
MQETFFGSEKEENQKLTPMMRQYKEIKDKYSDSILLFRMGDFYEVFFDDAKVVSDILGLT
LTKRANVPMAGVPYHAIDNYLSRLVKSGMKIAICDQMEDPKLAKGIVKREVTQVITPGTI
SENKYLESKSNNYLASVIVSKSEKNAALSICDISTGELYATEINSNLENHNEALKEIINE
LTEEIIRFSPKEIMTIESVSESIIIKEIQNKFNNVFYSTTPNYTAEHSYAYKTLTNHFKT
VSLKSFGIEEKPLLISLLGSTIFYIQELSKTSLEHISNIKLYNRRDSMTLDYATIASLEI
LETIRNDNNKMTLFDTIDRTKTSMGARYLKRIIVEPLLNIEEINKRLNNVEFFYKNQKFM
YKIRDLLQDIGDIERLASKLALGRINPKELVSLKRFLVGSLEVVTELAMNNFEDVNFEEV
NDIKIITDLIERAILEDPKVVINEGDIIKDDYDETLKKYNEARREGRSWIAELEHNYKQD
TGINNLKIRYNNVIGYYVEVTKANVSSVPSDFIKRQTLIGSERYTTSKLMEYETIINEAN
EKSYALEYDIFIEVRNKTNEYLNSILKMARVISIIDVYSSLACLAKEDNYIKPIITDDGI
IDIKDGRHPVVEVNLKTESFIPNDTYLDNKNEHMLIITGPNMSGKSTYLRQTALIVLLAQ
IGSFVPASSAKISIVDRIFTRVGASDNIARGESTFLVEMNETAYILNHCTDKSLVIMDEI
GRGTSTYDGLSIAWAIVEYLVHEENKKAKTLFATHYHELTMLEDLEGVKNYKVLVEEYKD
EIIFMKKVTEGAAKSSYGIYAAKIAGAPNKVIKRATEILKRLEADASVQVENIELNTQKS
KNILPLYEEPKIIEKESEIEKEIKDLNINTITPLDAMNLINKWKNMI
Download sequence
Identical sequences G0ELJ4
gi|384209630|ref|YP_005595350.1| WP_014488585.1.89931

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