SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ENSMMUP00000004838 from Macaca mulatta 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMMUP00000004838
Domain Number 1 Region: 107-217
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 5.24e-27
Family Canonical RBD 0.0000154
Further Details:      
 
Domain Number 2 Region: 18-105
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 1.75e-25
Family Canonical RBD 0.00000706
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMMUP00000004838   Gene: ENSMMUG00000003619   Transcript: ENSMMUT00000005134
Sequence length 352
Comment pep:known chromosome:MMUL_1:3:100073668:100079702:1 gene:ENSMMUG00000003619 transcript:ENSMMUT00000005134 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
QKTLETVPLERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRS
RGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKE
DTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHN
AEVRKALSRQEMQEVQSSRSGRGGNFGFGDSRGGGGNFGPGPGSNFRGGSDGYGSGRGFG
DGYNGYGGGPGGGNFGGSPGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNYN
DFGNYNQQPSNYGPMKSGNFGGSRNMGGPYGGGNYGPGGSGGSGGYGGRSRY
Download sequence
Identical sequences F1LNF1 F6VYB1 G5BD43 G7MLM6 G7P0P7
ENSECAP00000001477 ENSECAP00000001477 HGL_H00000354021-2 10116.ENSRNOP00000015152 9544.ENSMMUP00000004838 9796.ENSECAP00000001477 ENSMMUP00000004838 ENSMMUP00000004838 ENSRNOP00000015152 ENSRNOP00000015152

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]