SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|428772016|ref|YP_007163804.1| from Cyanobacterium stanieri PCC 7202

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|428772016|ref|YP_007163804.1|
Domain Number 1 Region: 334-466
Classification Level Classification E-value
Superfamily Duplicated hybrid motif 6.8e-59
Family Peptidoglycan hydrolase LytM 0.00031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|428772016|ref|YP_007163804.1|
Sequence length 469
Comment peptidase M23 [Cyanobacterium stanieri PCC 7202]
Sequence
MNFQPTSQNLYKGAFAIALGIIAIPESASAVVINEPVLQNPNAPKLLISDSEQLASLSPY
QEEISKSEKFAHRSPEIQSQEFDIASNRRLNQLLSANEQPELTPVFNLANAPSGNTTNPE
EISKYQNKEQQNASSLNFGNHQENQIAQSSPEGISIPVYTNNQAEVNNQTNQSTSGIPIQ
IIPASGNQPHNNNYSQNEPVLIPTQTDFTLTNNPPTQTFEGEEQTTARNSFPQHSPEIQE
DFSQTYKPEEYQENAGVPIQVQSFTANNQPTLITNQENLNFNSRSISESIATNPPSPSRE
VASIPIQVDFYNPTNMPPAGDIGSPELPSQLNSPDQHLPETRRPFNGYIWPARGTFTSGF
GPRWGRMHRGIDIAGPVGTPIVAAADGEVISSGWNSGGFGNWVRIRHSDGSITLYAHNSR
NHVRRGQQVRQGQLIADMGSTGFSTGPHLHFEIHRGGRAVDPMGHLARR
Download sequence
Identical sequences K9YIC0
gi|428772016|ref|YP_007163804.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]