SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for evm.TU.supercontig_9.61 from Carica papaya

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  evm.TU.supercontig_9.61
Domain Number 1 Region: 538-638
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 0.000000000891
Family Single strand DNA-binding domain, SSB 0.037
Further Details:      
 
Weak hits

Sequence:  evm.TU.supercontig_9.61
Domain Number - Region: 396-465
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 0.00657
Family Single strand DNA-binding domain, SSB 0.037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) evm.TU.supercontig_9.61
Sequence length 662
Sequence
MEIDHGEEEDPFLAFIEYARSVIAPTDEGDGEVENGNGAETSGPGWSWIASRILKTCIAY
SSGVTAAILLSDLSQAWNEQHRVGAPKKRPELINQLKKNHRRTKLPNTVTIDSIYEKNFL
SLGSVLEVVIVDTFVLPGTNIYMLTVGDFWSSSTIDLYLHRRYYELVDPENGILKKGREV
LLTGCYLRTAREGSSSSRLLPTEYLVILLDEDQDDDAVLIGAQFCSDSFSSISLDAVNDG
ASYSLYARQDLGIESIGSMEIHGKIDGLQKKQITLIDNDGIRLKFLLWGEQVPLANLFSV
GSMLALDRPYIASSAESGMETNDEFCLEYGSATQLYLVPVIQHEEQVSVALTQSRYQGSR
LLSAIDPSQGPRVSQVSLPCDSQGSIDFSNYPFRSFIVELRDKMTSISLYGVVRELFQAR
NTSGVIFSLKIEDTTGAIWAKLHFSRFWSLGRIGLGHVVYISGLTCCKTQQNRLEVLWDE
KNGGAALINLSCLPALLNSSCLHKSSCLTDLFSGQTSCMHICRVRLDQIDHCHVSTRLSH
SVCGHFVNEMPGGVLQCSFCHYNCSAEVLRTFHLKIALADDTAKIFAWCTGQTATELLQI
SPDEFCELSEDEQFMYPSSLENEIFMVALVNCKTQSRERSNSLNPETDDTVSWEITRALK
LE
Download sequence
Identical sequences evm.TU.supercontig_9.61

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]