SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|427716162|ref|YP_007064156.1| from Calothrix sp. PCC 7507

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|427716162|ref|YP_007064156.1|
Domain Number 1 Region: 186-314
Classification Level Classification E-value
Superfamily YjgF-like 5.97e-44
Family YjgF/L-PSP 0.0000303
Further Details:      
 
Domain Number 2 Region: 6-159
Classification Level Classification E-value
Superfamily Pentapeptide repeat-like 7.95e-42
Family Pentapeptide repeats 0.00026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|427716162|ref|YP_007064156.1|
Sequence length 315
Comment endoribonuclease L-PSP [Calothrix sp. PCC 7507]
Sequence
MDAEELLENYAMGHRHFLGENLRGVDLKGANLRDIDLTEVDLTGADLNDANLSNATLRRT
DLTRASLTGANLSGLVDTSYLNLSGADLSGADLRAANLQGVNLKKACLQSVNLDTADLQA
VDLRRANLKGASLRRADLTGANIYGANLEDADLTGAIMPDGEVYQPIASEVKVGNQEVSL
EKVISMTREIINTDKAPAPVGPYNQAIAASGKFIFVAGQIAIDPRLGDVVYTDDVVKQTE
QVIANLEAILIAAGATFQNVVKTTVFLASLKDFAAVNAVYAKYFPEDTAPARACVEVSRL
PKDVLVEIDCIAVIQ
Download sequence
Identical sequences K9PFL2
WP_015127145.1.42896 gi|427716162|ref|YP_007064156.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]