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Domain assignment for ENSRNOP00000008854 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000008854
Domain Number 1 Region: 16-79
Classification Level Classification E-value
Superfamily DNA-binding domain 0.00000589
Family Methyl-CpG-binding domain, MBD 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000008854   Gene: ENSRNOG00000006209   Transcript: ENSRNOT00000008854
Sequence length 1005
Comment pep:known chromosome:Rnor_5.0:7:70745585:70751297:-1 gene:ENSRNOG00000006209 transcript:ENSRNOT00000008854 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MNGGNESSAADRAGGPAATAVPIGWQRCVREGAVYYISPSGTELSSLEQTRSYLLSDGTC
KCGLECPLNVPKVFNFDPLAPVTPGGAGVGPASEEDMTKLCNHRRKAVAMATLYRSMETT
CSHSSPGEGASPQMFHTVSPGPASVRPSCRVPPTTPLNGGPGSIPQEPPSVPQAFPPLTG
PAGLFPPRLPDPVPSAGSSSPCFLPRGNAPSPAPPPPSAISLNAPSYNWGASLRSNLVPS
DLGSPPAPHASSSPPSDSPLFHCSDALTPPPVPPSNNLPGPPGPPGSTTQPPVSSATMHL
PLVLGSLGGGPTVEGPGAPPFLASSLLSAAAKAQQPQLPPPSTLQGRRPRAQAPSASHAS
PRPSQRRPRRPPTVLRLLEGGGPQSPRRSRPRAPAPVPQPFPLPEPSQPILPSVLSLLGL
PTPGPSHSDGSFNLLGSDAHLPPPPALSSGSPPQPRHPIQPSLPGTTSGSLSSVPGAPAP
PAASKAPVVPSPVLQSPCDKGLGLGAGPACPLPPLAGEEAFPFPSPEQGLALSGAGFPGM
LGALPLPLSLGQPPPSPLLSHSLFGVLAGAGQPPPEPLLPPPGGPGPPLAPGEPEGPSLL
VASLLSPPPSDLLPPPAPPSNLLASFLPLLALGPTAGDGEGSAEGAGGPNGEPFSGLGDL
PPLLFPPLSAPPTLIALNSALLAASLDPPSGTPPQPCVLSAPQPGPPTSSVTTATTDPGA
SSLGKAPSNSGRPPQLLSPLLSASLLGDLSSLTSSPGTLPSLLQPPGPLLSSQLGLQLLP
GGGAPPTLSEASSPLACLLQSLQIPPEQPDAPCLPPESPASALEPEPARPPLSALAPPHG
SPDPPVPELLTGRGSGKRGRRGGGGLRGINGETRPGRGRKPGSRREPGRLALKWGTRGGF
NGQMERSPRRTHHWQHNGELAEGGAEPKDPPLPGPHPEDLKVSPGIVRKSRRGRRRKYNP
ARNSSSSSRQDVTLEPSPTTRAAVPLPPRARPGRPAKNKRRKLAP
Download sequence
Identical sequences D3ZCX1
NP_001164037.2.100692 NP_001164037.2.4139 XP_008763629.1.100692 ENSRNOP00000008854

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