SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSRNOP00000014270 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSRNOP00000014270
Domain Number 1 Region: 14-120
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 1.69e-24
Family DEP domain 0.014
Further Details:      
 
Domain Number 2 Region: 219-392
Classification Level Classification E-value
Superfamily GTPase activation domain, GAP 4.91e-16
Family BCR-homology GTPase activation domain (BH-domain) 0.0073
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000014270   Gene: ENSRNOG00000010701   Transcript: ENSRNOT00000014270
Sequence length 529
Comment pep:known chromosome:Rnor_5.0:2:59075286:59147310:1 gene:ENSRNOG00000010701 transcript:ENSRNOT00000014270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEHRIVGPGPYRATRLWNETVELFRARMPLRKHRCRFKSYEHCFTASEAVDWLHELLRNS
QNFGPEVTRKQTVQLLRKFLKNHVIEDIKGKWGQEDFEDNRHLYRFPPSSPLKPYPKKPL
YQRDVIKFPEWNDPPPGTSQENIPVRPIVMNSEMWFKRHSIAIGEVPACRLIHRRQLTEA
NVEEIWKSTTLSHLQRILGLDSLEEVLNTKLVNSKFIIHNVYSVSKQGVVILDDKSKELP
HWVLSAMKCLANWPNCTDWKQPMYLGFEKDVFKTIADYYGHLKEPLLTFHLFDAFVSVLG
LLPKEQMATEAFQICCLLLPPENRRKLQLLMRMMARICLNKEMPPLCDGFGTRTLMVQTF
SRCILCSKDEVDLDELLAARLVTFLMDNYQEILKVPLVLQTSIEERVAHLRRVQIKYPGA
DMDITLSAPSFCRQISPEEFEYQRAYGSQEPLAALLEEVIVDDKLSNKEKKKKLKQFQKS
YPEVYQERFPTPESEALLFPEKPKAKPQLFMWALRKPFQPFQRTRSFRM
Download sequence
Identical sequences D4AA32
ENSRNOP00000014270 10116.ENSRNOP00000014270 NP_001101121.1.100692 NP_001101121.1.4139 ENSRNOP00000014270

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]