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Domain assignment for ENSRNOP00000029769 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000029769
Domain Number 1 Region: 86-180
Classification Level Classification E-value
Superfamily PDZ domain-like 1.31e-27
Family PDZ domain 0.0000272
Further Details:      
 
Domain Number 2 Region: 307-400
Classification Level Classification E-value
Superfamily PDZ domain-like 2.37e-27
Family PDZ domain 0.00012
Further Details:      
 
Domain Number 3 Region: 1-85
Classification Level Classification E-value
Superfamily PDZ domain-like 2.5e-26
Family PDZ domain 0.0000835
Further Details:      
 
Domain Number 4 Region: 403-509
Classification Level Classification E-value
Superfamily SH3-domain 2.63e-26
Family SH3-domain 0.0000769
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000029769   Gene: ENSRNOG00000022635   Transcript: ENSRNOT00000034416
Sequence length 517
Comment pep:known chromosome:Rnor_5.0:1:162798344:163450340:1 gene:ENSRNOG00000022635 transcript:ENSRNOT00000034416 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
GNSGLGFSIAGGTDNPHIGDDPGIFITKIIPGGAAAEDGRLRVNDCILRVNEVDVSEVSH
SKAVEALKEAGSIVRLYVRRRRPILETVVEIKLFKGPKGLGFSIAGGVGNQHIPGDNSIY
VTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNTSDVVYLKVGKPTTIY
MTDPYGPPDITHSYSPPMENHLLSGNNGTLEYKTSLPPISPGRYSPIPKHMLVEDDYTRP
PEPVYSTVNKLCDKPASPRHYSPVECDKSFLLSTPYPHYHLGLLPDSDMTSHSQHSTATR
QPSVTLQRAISLEGEPRKVVLHKGSTGLGFNIVGGEDGEGIFVSFIADLSGELQRGDQIL
SVNGIDLRGASHEQAAAALKGAGQTVTIIAQYQPEDYARFEAKIHDLREQMMNHSMSSGS
GSLRTNQKRSLYVRAMFDYDKSKDSGLPSQGLSFKYGDILHVINASDDEWWQARRVILDG
DSEEMGVIPSKRRVERKERARLKTVKFNAKPGVIDSK
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Identical sequences ENSRNOP00000029769

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