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Domain assignment for ENSRNOP00000039009 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000039009
Domain Number 1 Region: 1-257
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 2.56e-55
Family L-arabinose binding protein-like 0.00042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000039009   Gene: ENSRNOG00000050831   Transcript: ENSRNOT00000052029
Sequence length 696
Comment pep:known chromosome:Rnor_5.0:1:66811997:66829315:1 gene:ENSRNOG00000050831 transcript:ENSRNOT00000052029 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
ISYSSSLPSLSDKIQFPSFLRTLPSDLTSCHAVTQLIIHFQWSWVIILAQDDDFGEQASS
LATQQLSAAGVCIEFHLHVPSQQTLGKIGETVQKMQKCTARVVLVFLSNSNFQLILHGLL
AVPVSGQVWVSKGTLHMALALTVPGVFQVLQGTFGLLYHSSRAIGFPEFLTHLSPSQTPE
DMFIKKFWEFTFDCTWPYQNSTVTEGVQICSGNESLKNKPHPFPEVSKIDAAYTAVYSIA
HALHDMVYRHVESPNIKYISNAILYHLTYIYVCVCVSFDIYIYICTCICGRHMCVVMQAH
DRAMSIPLSTAFIVSHTFGYVVPSYSLNSKKFLISFFISSLTRLSLLLPTICLESCFPAF
HSEVVSVFVSEACFLHSVFVLLIDMKRCLLCPKEQYSSNTRDHCLPRTEIFLAFEEPLGF
ILALMAILLAGLALLVLGVFLKHRDIPVVRANNRTLSYFLLISLSLCSLCSLLFLGRPTV
TTCLLRQTTFAVVFTVAVSSVLAKTVTVVLAFRVTKPGSRIQVCLSPGASTSVILIASLI
QTVLCGVWLATSPPFPERDMISEPRHIVIQCQEGSGATFFCVLGFLGFLAVGTFSVAFLA
RDLPDVFNETKFLTFSMLLFCSVWTAFLPLYHSARGKSTVAVEIFSILASTDGLLCGIFI
PKCYIILLKPEKNTPAWLRQGRCAHQDRQFSMLHRR
Download sequence
Identical sequences D3ZQW6
ENSRNOP00000039009

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