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Domain assignment for ENSRNOP00000053077 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000053077
Domain Number 1 Region: 259-321
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.00000000000000842
Family PHD domain 0.005
Further Details:      
 
Domain Number 2 Region: 52-112
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.0000000000000157
Family PHD domain 0.0011
Further Details:      
 
Domain Number 3 Region: 812-871
Classification Level Classification E-value
Superfamily SMAD/FHA domain 0.0000000555
Family FHA domain 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000053077   Gene: ENSRNOG00000009566   Transcript: ENSRNOT00000056234
Sequence length 1004
Comment pep:known chromosome:Rnor_5.0:10:66762563:66810434:1 gene:ENSRNOG00000009566 transcript:ENSRNOT00000056234 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MWEKMETKTIVYDLDTSGGLMEQIQALLAPPKTDEAEKRSRKPEKESRRSGRATNHDSCD
SCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRRKKREQKKELGHVNG
LVDKSSKRTTSPSSDTDLLDRPASKTELKAIAHARILERRASRPGTPTSNASTETPTSEH
NDVDEDIIDVDEEPVAAEPDYVQPQLRRPFELLIAAAMERNPTQFQLPNELTCTTALPGS
SKRRRKEETTGKNVKRTQHELDHNGLVPLPVKVCFTCNRSCRVAPLIQCDYCPLLFHMDC
LEPPLTAMPLGRWMCPNHIEHVVLNQKNLTLSNRCRVFDGFQDTISQHAVKVDFLNRIHK
KHPPNRRVLQPAKRRSLKVPDAIKSQYQFPPPLIAPAAIRDGELICSGVPEESQTHLLNS
EHLATQTEQQEWLCSVVALQCSILKHLSAKQMPSHWDSEQTEKADIKPVIVTDSSITTSL
QTADKAPLPSHYPLSCPSAMSTQNSLGCSPPHQPPTLEDISCSSCVEKSKKAPCGTANGP
VNTEVKANGPHLYSSPTDSSDPRRLPGANTPLPGLTHRQGWPRPLTPPSAGGLQNHAVGI
IVKTENATGPSSCPQRSLVPVPSLPPSIPSSCASIENTSTLHRKTVQSQIGPSLTESRPL
GSPPNATRVLTPPQAAGDSILATGANQRFCSPAPSSDGKVSPGTLSIGSALTVPSFPANS
TAMVDLTNSLRAFMDVSGEIEINMLDEKLIKFLALQRIHQLFPSRGQASPGSVGTHPLSS
GGHHTEVQRKEVQARAVFYPLLGLGGAVNMCYRTLYIGTGADMDVCLTNYGHCNYVSGKH
ACIFYDENTKHYELLNYSEHGTTVDNVLYSCDFSEKTPPTPPSSIVAKVQSVIRRRRHQK
QDEEPSEEAAMMSSQAQGPQRRPCNCKASSSSLIGGSGAGWEGTALLHHGSYIKLGCLQF
VFSITEFATKQPKGDANLLQDGVLAEKLSLKPHQGPVLRSNSVP
Download sequence
Identical sequences F1LM99
NP_001013135.2.100692 NP_001013135.2.4139 ENSRNOP00000053077

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