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Domain assignment for ENSRNOP00000059120 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000059120
Domain Number 1 Region: 3411-3578
Classification Level Classification E-value
Superfamily SPOC domain-like 7.45e-64
Family SPOC domain 0.0000000225
Further Details:      
 
Domain Number 2 Region: 409-563
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 1.84e-31
Family Canonical RBD 0.0032
Further Details:      
 
Domain Number 3 Region: 1-64,305-388
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.0000000000567
Family Canonical RBD 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000059120   Gene: ENSRNOG00000033556   Transcript: ENSRNOT00000067517
Sequence length 3579
Comment pep:known chromosome:Rnor_5.0:5:163736425:163790133:-1 gene:ENSRNOG00000033556 transcript:ENSRNOT00000067517 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
RYGRVESVKILPKRGSEGGVAAFVDFVDIKSAQKAHNSVNKMGDRDLRTDYNEPGTIPSA
ARGLDDTVSIASRSREVSGFRGSGGGPAYGPPPSLHAREGRYERRLDGASDNRERAYEHS
AYGHHERGTGAFDRTRHYDQDYYRDPRERTLQHGLYYTSRSRSPNRFDAHDPRYEPRARE
QFTLPSVVHRDIYRDDLTREVRGRRPERNYQHSRSRSPHSSQSRNQSPQRLASQASRPTR
SPSGSGSRSRSSSSDSISSSSSSSTDSSDSSSTSSDDSPARSVQSAAVPAPTSQLLSSLE
KDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGASEERYGLVFFRQQE
DQEKALTASKGKLFFGMQIEVTAWVGPETESENEFRPLDERIDEFHPKATRTLFIGNLEK
TTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKMDGEYLGNNRLK
LGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGLALVLYSEIEYAQA
AVRETKGRKIGGNKIKVDFANRESQLAFYHCMEKSGQDMRDFYEMLTERREERRGSYDYS
QDRTYYENVRTPGAYPEDSRRDYPARGRELYSEWETYQGEYYESRYYDDPREYREYRSDP
YEQDIREYSYRQRERERERERFESDRDHERRPIERSQSPVHLRRPQSPGVSPAHSERLPS
DSERRLYRRSSERSGSCSSVSPPRYDKLEKARLERYTKNEKTDKERIFDAERVERERRVI
RKEKVEKDKPERQKRKGKVHSPSSQSSETEQENDRDQSPEKPRASTKLSRDRTDKEGPAK
NRLELVPCVVLTRVKEKEGKVIDHPPPEKLKARLAHDTAKSSVLDQKSQASQVEPPKVDA
ARGKALREKAFSSHAEVVDKEGRPKLRKHLKPEQAPELSALDLEKLEARKRRFADSSLKV
EKPRPEVRKTSPEAEDTRALLKKQPDTPRDGILLREGESERKPVRKEILKRESKKTKLER
LNSTLSPKDCQEPAAVSAGSGSRPSSDVHAALGEPVHGSVETQEAQPKKVMPSKPRLKQL
QLLDSQGPEKEEVRKNYCRLREDPVEHKAGQEKPHGVNAEEKLGIDIDHTQSYRKQMEQS
RRKQQMEMEIAKSEKFGSPKKDVDEYERRSLVHEVGKPPQDVTDDSPPSKKRRTDHVDFD
ICTKRERNYRSSRQISEDSERTSCSPGVHHGSFHEDDDPIGSPRLMSVKGSPRVDDKGLP
YSNVAVREDPFRCTPYDSGKREQAADMAKIKLSVLSSEGEPNRWDPQMKQDPSRFDVSFP
NSIIKRDSLRKRCVRDLEPGEVPSDSDEDAEHRAQSPRASSFYDSPRLSFLLRDRDHKLR
DRDDRLSSSLERNKFYSFALDKTITPDTKALLERAKSLSSSREENWSFLDWGSRFANFRD
NKDKEKVDSAPRPIPSWYMKKKKIRTDSEGKLDDKKDEHREEEQERQELFASRFLHSSIF
EQDSRRLQHLERKSEESDFPPGRLYGRQASEGANSTSDSVQEPVVLFHSRFMELTRMQQK
EKEKDQKPKETEKQEGPETPKTPEPTTETKEPEPKAPVSVALPAITAVTPEPPPPAAAAE
KAEETSEAPSLAGERPEEPTPVLEETKLVSEPPSESVEQRKQVDLSPGKDSHDSTAVVAS
TPPESTTTDTVPCVDAEPLTPGTTVSQVESSADPKPSSPQPPSKLTQRCEEAEEPKVERP
ETTASIEPDATEKAEVVPEVQPPASEDVEASPPVTAKDRKTTKSKRSKTSVPAAAASIVE
KPVTRKSERIDREKMKRSSSPRGEAQKLLELKMEADKVTRTASKSSGGDTEHPEPSLPLS
RTRRRNVRSVYATMGDHESRSPAKEPTEQPRVTRKRLERELQEAVVVPATPRRGRPPKTR
RRVEEGGEQERKEPADTPRPAEGRRSPRSQKLAATGGPQGKRGRNEHRAEAAEATAQVSA
REGNAKARGDREAASETRRDRKDPSTDKDGPDIFPVEVERKPPEKTYKSKRGRARSTRSG
MDRAAHLKSLEMARQAADKEAEPVAASPEKNESPLEGSGVSPQLADNPADPDKEAEKESV
SASTVSPEARQLTKQMELQQAVENIAKLAEPSAAAADKGTATATSEEPAAEDGHKPAHQA
SETELAAAIGSIISDSSGEPENFSASPSVPPGSQTHLQEGMEPGPHEATPGILETEAATE
SSAQQASASDPPAGSADTKEARGNSSDSVQQAKEAKVAVTPPRKDKGRQKTTRSRRKRNV
NKKVAAATETRASEAEQPQSESPAAAAAAAAAPEEPQEEKQSEKPHSPLRECTSDPSKTP
PAESLSQENSVEEKTPCKTPAPPDLPPLSQPALVDDEPQARFKVHSIIESDPVTPPSDSS
IPPPTIPLVTIAKLPPPVIPGGVPHQSPPPKVTEWITRQEEPRAQSAPSPALPPDTKASD
VDTSSSTLRKILMDPKYVSATGVTSTSVTAAIAEPVSAPRLQEAPAPPCEPKRPSSEEKV
AAAVPHADTQASEVPVAADKEKVAPVIAPKITSVISRMPVSIDLENSQKITLAKPAPQTL
TGLVSALTGLVNVSLVPVNALKGPVKGSVATLKGLVSTPAGPVNLLKGPVNVLTGPVNVL
TTPVSATVGTVSAAPGTVTAACGVTATTGTAAMSGAVPAPAAKGKQRSSSNENSRFHPGS
MSVIDDRPADTGSGAGLRVNTSEGVVLLSYSGQKTEGPQRISAKISQIPPASAMDIEFQQ
SVSKSQVKADSVTPTQAAPKGPQTPSAFANVAAHSTLVLTAQTYNASPVISSVKTDRPSL
EKPEPIHLSVSTPVTQGGTVKVLTQGINTPPVLVHNQLVLTPSIVTTNKKLADPVTLKIE
TKVLQPANLGPTLTPHHPPALPSKLPAEVNHVPSGPSNPADRTIAHLATTKPDTHSPRPT
GPTPGPFPRACHPSSTTSTALSTNATVMLAAGIPVPQFISSIHPEQSVIMPPHSITQTVS
LGHLSQGEVRMSTPTLPSITYSIRPETLHSPRAPLQPQQIEARAPQRVSTPQPATTAVPA
LATQHPPEEEVHYHLPVARAAAPVQSEVLVMQSEYRLHPYTVPRDVRIMVHPHVTAVSEQ
PRATEGVVKVPPASKAPQQLVKEVVKTSDAKAVPAPAPVPVPVPVPTPAPPPHGEARILT
VTPSSQLQGLPLTPPVVVTHGVQIVHSSGELFQEYRYGDIRTYHAPAQLTHTQFPVASSI
NLPSRTKTSAQGPPESEPLQSTQPAQPAPSTQSTQPVPPAPPCQPSQLSQPAQPPSGKIP
QVSQEAKGTQTGGIEQTRLPAMPTNRPSEPHAQAQRAPGETPQPAHPSPVSVAMKPDLPT
PLASQAAPKQPLFVPVNSGTSTPPGLALPHAEAQPAPKQDSAPHGTPQRPVDMVQLLKKY
PIVWQGLLALKNDTAAVQLHFVSGNNVLAHRSLPLSEGGPPLRIAQRMRLEASQLEGVAR
RMTVETDYCLLLALPCGRDQEDVVSQTESLKAAFITYLQAKQAAGIINVPNPGSNQPAYV
LQIFPPCEFSESHLSRLAPDLLASISNISPHLMIVIASV
Download sequence
Identical sequences ENSRNOP00000059120

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