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Domain assignment for ENSRNOP00000064111 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000064111
Domain Number 1 Region: 34-503
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 7.4e-114
Family L-arabinose binding protein-like 0.00093
Further Details:      
 
Weak hits

Sequence:  ENSRNOP00000064111
Domain Number - Region: 514-552
Classification Level Classification E-value
Superfamily TNF receptor-like 0.0589
Family TNF receptor-like 0.019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000064111   Gene: ENSRNOG00000047568   Transcript: ENSRNOT00000071011
Sequence length 854
Comment pep:known chromosome:Rnor_5.0:12:23071921:23164438:-1 gene:ENSRNOG00000047568 transcript:ENSRNOT00000071011 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPTWIFFFFTHKLPMFLCKLLTHECFVSSTDNVYQDGDLVISAFLPLYTYQTSQHTEGAE
SIDVSPRIAPQNYQFVMALIFAIEEINRNPILLPNLTLGYNIHSAGSIESETVVSFLKWL
TGQDRLIPNYTCKTKEKSVAAITGTTWEISSLIGIFLSLYKYPQLSIGPFEPSMNNSEKF
PFLYQMATKEFSLALGMVSLFVHFRWNWVGLVISEDENGVNFVTDLIPQMERNTVCVAFM
EFIPVTHMMDLENTYEYPIRIMRNPAKVVIIYANTDTSLGVLFRRWEYILPWRIWVTSSQ
WEVVTSMRHLILDSFHGTLIFSQRQGDISTFKEFVKTVRPSKYPDDIFLARLWEIYFDCA
ISNATCKSLKNCSSRGNLGLLPWYHFDIAISTGSYHVYNAVYAMAHTMHKMLIQEVDIQG
VKNGGSMDFPPLKLNSLLKNIKFMNPGGDPISLNPSEKLHIDYDILNFWDFPQGLTYKVK
VGTFSPYFPPGQQLSISEDRIEWSIGVEQQIPVSVCSESCGPGFRQSLQEEKVACCFDCV
PCPENEISNGTGKYIDQCVKSTEDQYANTDRTLCIQKAVTFLAFENPLGMTLASMALCFS
ILTSFVLGIFVKYQNTPVVKANNSTLNYILLISLTFCFLCSFLFIGQPNAVTCILQQTTF
GVVFTVAVSTVLAKTITVILAFKSTAPGRRLRCLLISGAPKFIIPICTLIQTVFCGVWLG
ISPPFVDTDAHSEHGHIIIMCNKGSVTAFYCVLGYLGALSLVSFTVAFMARNLPDAFNEA
KFLTFSMLVFLSVWITFLPVYHSTKGKIMVVVEVFSILASSTGLLGCIFILKCYIILARP
DMNSLKCRQNRVQW
Download sequence
Identical sequences ENSRNOP00000064111

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