SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for ENSRNOP00000064197 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000064197
Domain Number 1 Region: 1-86
Classification Level Classification E-value
Superfamily Ribosomal L11/L12e N-terminal domain 3.27e-32
Family Ribosomal L11/L12e N-terminal domain 0.00000734
Further Details:      
 
Domain Number 2 Region: 76-148
Classification Level Classification E-value
Superfamily Ribosomal protein L11, C-terminal domain 9.03e-18
Family Ribosomal protein L11, C-terminal domain 0.0048
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSRNOP00000064197   Gene: ENSRNOG00000029115   Transcript: ENSRNOT00000041210
Sequence length 165
Comment pep:known chromosome:Rnor_5.0:7:59772308:59773033:-1 gene:ENSRNOG00000029115 transcript:ENSRNOT00000041210 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV
KLTIQNRQAQIEVVSSASALIIKALKEPPRDRKKQKNIKHNGNITFDEIVNIARQMRHRS
LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSSAVECPAS
Download sequence
Identical sequences M0R4B6
ENSRNOP00000064197

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